RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SLC25A47Q6Q0C1 308 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 LACC1Q8IV20 430 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 PIK3R3Q92569 461 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 TSACCQ96A04 125 aaPredicted RBP4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 BSCL2Q96G97 398 aaPredicted RBP4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 CCDC114Q96M63 670 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 GDAP1L1Q96MZ0 367 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 JAKMIP1Q96N16 626 aaKnown RBP4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 PI4K2AQ9BTU6 479 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 MINDY3Q9H8M7 445 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 RNF186Q9NXI6 227 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 ERAP1Q9NZ08 941 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 EPHA6Q9UF33 1036 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 RASAL2Q9UJF2 1139 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 A0A087WW49 117 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 PRSS46E5RG02 174 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 FLRT2O43155 660 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 ZG16O60844 167 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 RPN1P04843 607 aaKnown RBP4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 ANKRD34CP0C6C1 535 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 F3P13726 295 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 CD59P13987 128 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 KCNJ1P48048 391 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 TEAD2Q15562 447 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 ADAMTSL4-AS1Q5T5F5 129 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 PWWP2BQ6NUJ5 590 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 PRSS55Q6UWB4 352 aaPredicted RBP4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 Q6ZSR9 355 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 AMIGO1Q86WK6 493 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 NHLRC2Q8NBF2 726 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 UXS1Q8NBZ7 420 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 SLC37A3Q8NCC5 494 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 OR7A2PQ8NGA2 310 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 OR5AP2Q8NGF4 316 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 CTCFLQ8NI51 663 aaPredicted RBP4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 APOBEC4Q8WW27 367 aaKnown RBP4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 DNASE1L2Q92874 299 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 AZIN2Q96A70 460 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 PGM2Q96G03 612 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 DUX3Q96PT4 197 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 MLPHQ9BV36 600 aaPredicted RBP4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 MTMR12Q9C0I1 747 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 SDCBP2Q9H190 292 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 RIMS4Q9H426 269 aaPredicted RBP4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 RAVER2Q9HCJ3 691 aaKnown RBP4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 MAN2C1Q9NTJ4 1040 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 PKD2L2Q9NZM6 624 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 OR6C2Q9NZP2 312 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 MAN1B1Q9UKM7 699 aa4.51□□□□□ -1.69
HMGCS1-207ENST00000514610 ZNF195O14628 629 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 EPHB6O15197 1021 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 EDIL3O43854 480 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 SEC24AO95486 1093 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 TNNT3P45378 269 aaPredicted RBP4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 LEPRP48357 1165 aaKnown RBP4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 DNA2P51530 1060 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 HNRNPDQ14103 355 aaKnown RBP4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 RBBP7Q16576 425 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 ZNF74Q16587 644 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 NHSL2Q5HYW2 709 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 OR4C11Q6IEV9 310 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 OTOAQ7RTW8 1153 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 CPEB2Q7Z5Q1 589 aaKnown RBP4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 PIGWQ7Z7B1 504 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 DZIP1Q86YF9 867 aaKnown RBP4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 DDHD1Q8NEL9 900 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 DESI2Q9BSY9 194 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 RBM4Q9BWF3 364 aaKnown RBP4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 PPANQ9NQ55 473 aaKnown RBP4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 C19orf25Q9UFG5 118 aaPredicted RBP4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 MRPS28Q9Y2Q9 187 aaKnown RBP4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 KLK4Q9Y5K2 254 aa4.5□□□□□ -1.69
HMGCS1-207ENST00000514610 A4D1N5 150 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 MTMR11A4FU01 709 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 PI4K2BG5E9Z4 385 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 H0YAE9 185 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 NR5A2O00482 541 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 SLC30A4O14863 429 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 IFIT3O14879 490 aaKnown RBP4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 EXTL3O43909 919 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 SLU7O95391 586 aaKnown RBP4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 TGDSO95455 350 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 RLN1P04808 185 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 ZNF26P17031 533 aaPredicted RBP4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 CEBPBP17676 345 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 MUTP22033 750 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 SULT2A1Q06520 285 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 OPCMLQ14982 345 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 TWISTNBQ3B726 338 aaPredicted RBP4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 NHLRC1Q6VVB1 395 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 LEKR1Q6ZMV7 388 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 MSANTD1Q6ZTZ1 278 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 PTAR1Q7Z6K3 402 aaPredicted RBP4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 CREBRFQ8IUR6 639 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 RCOR2Q8IZ40 523 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 NIPA2Q8N8Q9 360 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 CCDC63Q8NA47 563 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 GPRC5AQ8NFJ5 357 aa4.49□□□□□ -1.69
HMGCS1-207ENST00000514610 GMPPAQ96IJ6 420 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms