RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SLC4A11Q8NBS3 891 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 OR10S1Q8NGN2 331 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 CFAP61Q8NHU2 1237 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 LNX1Q8TBB1 728 aaPredicted RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 SETD6Q8TBK2 473 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 CCDC107Q8WV48 283 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 ZFAND2BQ8WV99 257 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 BADQ92934 168 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 SIPA1Q96FS4 1042 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 CFAP57Q96MR6 1250 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 GLT1D1Q96MS3 346 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 ZNF582Q96NG8 517 aaPredicted RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 SPAG5Q96R06 1193 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 LMF2Q9BU23 707 aaKnown RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 NUP85Q9BW27 656 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 OR10A4Q9H209 315 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 GAREM1Q9H706 876 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 NOL11Q9H8H0 719 aaKnown RBP3.99□□□□□ -1.77
HTT-210ENST00000512909 EBF2Q9HAK2 575 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 EQTNQ9NQ60 294 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 CYP39A1Q9NYL5 469 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 OTOFQ9HC10 1997 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 DOCK2Q92608 1830 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 MYH1P12882 1939 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 ROBO3Q96MS0 1386 aa3.99□□□□□ -1.77
HTT-210ENST00000512909 DOCK1Q14185 1865 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 ABCB11O95342 1321 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 IGLV5-45A0A087WSX0 123 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 A0A0G2JNG1 304 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 A0A1W2PP11 408 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 HYKKA2RU49 373 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 SMTNL1A8MU46 457 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 H7C0S8 307 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 DUSP11O75319 330 aaKnown RBP3.98□□□□□ -1.77
HTT-210ENST00000512909 TADA2AO75478 443 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 CRYAAP02489 173 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 PRSS1P07477 247 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 ADRB2P07550 413 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 POLR2MP0CAP2 368 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 GM2AP17900 193 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 GNAZP19086 355 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 HSPA4P34932 840 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 ARCN1P48444 511 aaKnown RBP3.98□□□□□ -1.77
HTT-210ENST00000512909 ZNF132P52740 706 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 CCL23P55773 120 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 RPS6P62753 249 aaKnown RBP3.98□□□□□ -1.77
HTT-210ENST00000512909 AKAP17AQ02040 695 aaKnown RBP3.98□□□□□ -1.77
HTT-210ENST00000512909 KIR2DS5Q14953 304 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 TAF13Q15543 124 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 STXBP2Q15833 593 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 SETMARQ53H47 684 aaPredicted RBP3.98□□□□□ -1.77
HTT-210ENST00000512909 CXCL17Q6UXB2 119 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 ZBTB49Q6ZSB9 765 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 TLK2Q86UE8 772 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 SATL1Q86VE3 508 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 FAM114A1Q8IWE2 563 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 CDK20Q8IZL9 346 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 RBMXL3Q8N7X1 1067 aaKnown RBP3.98□□□□□ -1.77
HTT-210ENST00000512909 OR2AJ1Q8NGZ0 328 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 MOSPD2Q8NHP6 518 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 SPATA22Q8NHS9 363 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 LMO3Q8TAP4 145 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 DAZLQ92904 295 aaKnown RBP3.98□□□□□ -1.77
HTT-210ENST00000512909 ZNF354BQ96LW1 612 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 TCEANC2Q96MN5 208 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 ZNF830Q96NB3 372 aaPredicted RBP3.98□□□□□ -1.77
HTT-210ENST00000512909 FERMT1Q9BQL6 677 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 MIS12Q9H081 205 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 CSTL1Q9H114 145 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 NPAP1Q9NZP6 1156 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 OSGIN1Q9UJX0 560 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 SLC7A7Q9UM01 511 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 ICAM5Q9UMF0 924 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 NME7Q9Y5B8 376 aa3.98□□□□□ -1.77
HTT-210ENST00000512909 MYO5AQ9Y4I1 1855 aaKnown RBP3.98□□□□□ -1.77
HTT-210ENST00000512909 RAD50Q92878 1312 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 SYNRGQ9UMZ2 1314 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 A0A0U1RQG5 324 aaPredicted RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 A0A1W2PRB8 838 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 ANKUB1A6NFN9 424 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 PRAC2D3DTV9 90 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 ZNF587BE7ETH6 402 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 UBE2CO00762 179 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 ZBTB5O15062 677 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 TO15178 435 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 FGF17O60258 216 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 NR3C1P04150 777 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 OR2T7P0C7T2 308 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 CALM1P0DP23 149 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 CALM2P0DP24 149 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 CALM3P0DP25 149 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 CASTP20810 708 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 CCND2P30279 289 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 MC5RP33032 325 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 FUT6P51993 359 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 TPD52P55327 224 aaPredicted RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 SP4Q02446 784 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 ITGA7Q13683 1181 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 PTPRCAPQ14761 206 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 NECTIN1Q15223 517 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms