RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 EIF2S1P05198 315 aaKnown RBP11.95□□□□□ -0.5
VEGFA-216ENST00000512683 HEXBP07686 556 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 ANXA5P08758 320 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 ATXN8OSP0DMR3 200 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 COX6A1P12074 109 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 EZRP15311 586 aaKnown RBP11.95□□□□□ -0.5
VEGFA-216ENST00000512683 SARNPP82979 210 aaKnown RBP11.95□□□□□ -0.5
VEGFA-216ENST00000512683 TRIP13Q15645 432 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-216ENST00000512683 TYSND1Q2T9J0 566 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 VWA2Q5GFL6 755 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 CNSTQ6PJW8 725 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 CES3Q6UWW8 571 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 RPTNQ6XPR3 784 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 TAX1BP1Q86VP1 789 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 CAND1Q86VP6 1230 aaKnown RBP11.95□□□□□ -0.5
VEGFA-216ENST00000512683 RERGQ96A58 199 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-216ENST00000512683 MS4A14Q96JA4 679 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 C10orf90Q96M02 699 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 OR2A5Q96R48 311 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 TUBB6Q9BUF5 446 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 FAM129AQ9BZQ8 928 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 ZNF700Q9H0M5 742 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 TRPC4Q9UBN4 977 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 SOX13Q9UN79 622 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 NEU2Q9Y3R4 380 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 NFS1Q9Y697 457 aa11.95□□□□□ -0.5
VEGFA-216ENST00000512683 MDC1Q14676 2089 aaKnown RBP11.95□□□□□ -0.5
VEGFA-216ENST00000512683 H0YIG0 161 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 ZG16O60844 167 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 ALOX12BO75342 701 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 VAPBO95292 243 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 RASAL1O95294 804 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 MLYCDO95822 493 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 PAMP19021 973 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 CHRM3P20309 590 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 OGNP20774 298 aaKnown RBP11.94□□□□□ -0.5
VEGFA-216ENST00000512683 AGAP20933 346 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 RPA3P35244 121 aaPredicted RBP11.94□□□□□ -0.5
VEGFA-216ENST00000512683 PTGER4P35408 488 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 VPS41P49754 854 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 TDGF1P3P51864 188 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 EIF3BP55884 814 aaKnown RBP11.94□□□□□ -0.5
VEGFA-216ENST00000512683 RBPJQ06330 500 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 GPS1Q13098 491 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 LONRF1Q17RB8 773 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 TTLL9Q3SXZ7 439 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 CCSMST1Q4G0I0 132 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 CTSL3PQ5NE16 218 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 ABHD17BQ5VST6 288 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 ANKRD22Q5VYY1 191 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 ZNF425Q6IV72 752 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 TMEM207Q6UWW9 146 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 PAQR7Q86WK9 346 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 REXO1L1PQ8IX06 675 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 ZNF808Q8N4W9 903 aaPredicted RBP11.94□□□□□ -0.5
VEGFA-216ENST00000512683 CSNK1A1LQ8N752 337 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 MCOLN3Q8TDD5 553 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 BRIX1Q8TDN6 353 aaKnown RBP11.94□□□□□ -0.5
VEGFA-216ENST00000512683 LPGAT1Q92604 370 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 THAP11Q96EK4 314 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.94□□□□□ -0.52e-10■■□□□ 11.8
VEGFA-216ENST00000512683 INTS10Q9NVR2 710 aaKnown RBP11.94□□□□□ -0.5
VEGFA-216ENST00000512683 STMN3Q9NZ72 180 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 PTGFRNQ9P2B2 879 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 CIDEBQ9UHD4 219 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 JRKLQ9Y4A0 524 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 CACNA1DQ01668 2161 aa11.94□□□□□ -0.5
VEGFA-216ENST00000512683 CELSR2Q9HCU4 2923 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 KCNE1BA0A087WTH5 132 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 GOLGA8KD6RF30 607 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 GOLGA8TH3BQL2 631 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 MED26O95402 600 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 KRT14P02533 472 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 ENO3P13929 434 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-216ENST00000512683 IL10P22301 178 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 FMO4P31512 558 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 BDKRB1P46663 353 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 AVPR1BP47901 424 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 TERF1P54274 439 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 PNLIPRP1P54315 467 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 FASTKQ14296 549 aaKnown RBP11.93□□□□□ -0.5
VEGFA-216ENST00000512683 CYP1B1Q16678 543 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 ICE2Q659A1 982 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 KIAA0930Q6ICG6 404 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-216ENST00000512683 XKRXQ6PP77 449 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 GFRALQ6UXV0 394 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 PCGF5Q86SE9 256 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 FJX1Q86VR8 437 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 ARHGEF39Q8N4T4 335 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 METTL27Q8N6F8 245 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-216ENST00000512683 METTL21AQ8WXB1 218 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 MAGOHBQ96A72 148 aaKnown RBP11.93□□□□□ -0.5
VEGFA-216ENST00000512683 C8orf44Q96CB5 159 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 MMABQ96EY8 250 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-216ENST00000512683 PBKQ96KB5 322 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 MAGEB10Q96LZ2 347 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-216ENST00000512683 TAAR6Q96RI8 345 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 YIPF2Q9BWQ6 316 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms