RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	ZDHHC2	Q9UIJ5	367 aa		5.09	□□□□□ -1.59
LINC01088-208	ENST00000511895	MTUS1	Q9ULD2	1270 aa		5.09	□□□□□ -1.59
LINC01088-208	ENST00000511895	NME7	Q9Y5B8	376 aa		5.09	□□□□□ -1.59
LINC01088-208	ENST00000511895	FAM169A	Q9Y6X4	670 aa		5.09	□□□□□ -1.59
LINC01088-208	ENST00000511895	XIRP2	A4UGR9	3374 aa		5.09	□□□□□ -1.59
LINC01088-208	ENST00000511895	COL4A5	P29400	1685 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	PCDH11X	Q9BZA7	1347 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	PCDH11Y	Q9BZA8	1340 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	IGHV4-61	A0A0C4DH41	118 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	LOC101059948	A0A1B0GTJ6	334 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	ATP6V0E1	O15342	81 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	OR10H2	O60403	315 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	EML2	O95834	649 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	IGHV4-59	P01825	116 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	EFNA1	P20827	205 aa	Predicted RBP	5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	ERVK11-1	P61568	191 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	HSPB3	Q12988	150 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	BECN1	Q14457	450 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	KRTAP27-1	Q3LI81	207 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	ELFN2	Q5R3F8	820 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	CYP4A22	Q5TCH4	519 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	TMEM139	Q8IV31	216 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	ZNF595	Q8IYB9	648 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	ADAD2	Q8NCV1	583 aa	Known RBP	5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	HCAR2	Q8TDS4	363 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	GIMAP5	Q96F15	307 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	SEPHS2	Q99611	448 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	NUP85	Q9BW27	656 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	LAT2	Q9GZY6	243 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	MORF4L1	Q9UBU8	362 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	DDX25	Q9UHL0	483 aa	Known RBP	5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	MRPS28	Q9Y2Q9	187 aa	Known RBP	5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	ZFYVE26	Q68DK2	2539 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	REV3L	O60673	3130 aa		5.08	□□□□□ -1.6
LINC01088-208	ENST00000511895	ZNF462	Q96JM2	2506 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	CACNA1H	O95180	2353 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	MYO15A	Q9UKN7	3530 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895		A0A1W2PN81	502 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	ANKRD61	A6NGH8	418 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	HMGB1P1	B2RPK0	211 aa	Predicted RBP	5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	WDPCP	O95876	746 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	TRUB2	O95900	331 aa	Known RBP	5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	CEACAM1	P13688	526 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	AKR1B1	P15121	316 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	CA4	P22748	312 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	CHRNA7	P36544	502 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	KIF26B	Q2KJY2	2108 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	LETM2	Q2VYF4	491 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	PHLDA2	Q53GA4	152 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	MFSD4B	Q5TF39	518 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	POMGNT2	Q8NAT1	580 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	DDHD1	Q8NEL9	900 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	OLIG1	Q8TAK6	271 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	TEKT4	Q8WW24	435 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	SECISBP2L	Q93073	1101 aa	Known RBP	5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	WBP2	Q969T9	261 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	URM1	Q9BTM9	101 aa	Known RBP	5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	SERINC1	Q9NRX5	453 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	TAB2	Q9NYJ8	693 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	HAO2	Q9NYQ3	351 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	SLC24A2	Q9UI40	661 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	PADI2	Q9Y2J8	665 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	TRPV2	Q9Y5S1	764 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	SMCHD1	A6NHR9	2005 aa		5.07	□□□□□ -1.6
LINC01088-208	ENST00000511895	GVINP1	Q7Z2Y8	2422 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	CDHR2	Q9BYE9	1310 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	RNASEH1	O60930	286 aa	Known RBP	5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	CGA	P01215	116 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	IGLV1-44	P01699	117 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	LDHC	P07864	332 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	NR2F1	P10589	423 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	PTPN3	P26045	913 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	WNT5A	P41221	380 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	FKBP1B	P68106	108 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	CALD1	Q05682	793 aa	Known RBP	5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	ITGA9	Q13797	1035 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	IL11RA	Q14626	422 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	P2RY6	Q15077	328 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	TOMM20	Q15388	145 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	CAMKMT	Q7Z624	323 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	NPEPL1	Q8NDH3	523 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	SSMEM1	Q8WWF3	244 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	SUSD6	Q92537	303 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	SYN2	Q92777	582 aa	Predicted RBP	5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	ZNF830	Q96NB3	372 aa	Predicted RBP	5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	MIS12	Q9H081	205 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	SDR39U1	Q9NRG7	319 aa	Predicted RBP	5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	INTS9	Q9NV88	658 aa	Known RBP	5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	DAPK2	Q9UIK4	370 aa		5.06	□□□□□ -1.6
LINC01088-208	ENST00000511895	RAB3GAP2	Q9H2M9	1393 aa		5.05	□□□□□ -1.6
LINC01088-208	ENST00000511895	FAM205A	Q6ZU69	1335 aa		5.05	□□□□□ -1.6
LINC01088-208	ENST00000511895	DMD	P11532	3685 aa		5.05	□□□□□ -1.6
LINC01088-208	ENST00000511895	LINGO3	P0C6S8	592 aa		5.05	□□□□□ -1.6
LINC01088-208	ENST00000511895	JAK1	P23458	1154 aa		5.05	□□□□□ -1.6
LINC01088-208	ENST00000511895	MNDA	P41218	407 aa		5.05	□□□□□ -1.6
LINC01088-208	ENST00000511895	MTHFR	P42898	656 aa		5.05	□□□□□ -1.6
LINC01088-208	ENST00000511895	SNRPD1	P62314	119 aa	Known RBP	5.05	□□□□□ -1.6
LINC01088-208	ENST00000511895	SP3	Q02447	781 aa		5.05	□□□□□ -1.6
LINC01088-208	ENST00000511895	PRPF4B	Q13523	1007 aa	Known RBP	5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms