RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 GNA13Q14344 377 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 PDIA5Q14554 519 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 NCF4Q15080 339 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 PDK3Q15120 406 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 SHBQ15464 509 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 RPE65Q16518 533 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 EDRF1Q3B7T1 1238 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 FAM153CQ494X1 144 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 CD300EQ496F6 205 aaPredicted RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 PDLIM3Q53GG5 364 aaPredicted RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 SPOUT1Q5T280 376 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 AGBL2Q5U5Z8 902 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 ATF7IP2Q5U623 682 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 LRRC66Q68CR7 880 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 SCARA5Q6ZMJ2 495 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 PAQR9Q6ZVX9 377 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 NEK8Q86SG6 692 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 ASPGQ86U10 573 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 YRDCQ86U90 279 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 KATNAL2Q8IYT4 538 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 DSELQ8IZU8 1212 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 RNF10Q8N5U6 811 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 CCDC63Q8NA47 563 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 MYCBPAPQ8TBZ2 947 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 SLC2A14Q8TDB8 520 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 DQX1Q8TE96 717 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 GDPD5Q8WTR4 605 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 TSEN15Q8WW01 171 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 TRIB2Q92519 343 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 LPIN2Q92539 896 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 ULK4Q96C45 1275 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 ORAI1Q96D31 301 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 SPATA33Q96N06 139 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 BTBD9Q96Q07 612 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 CITED1Q99966 193 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 GTPBP2Q9BX10 602 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 CDCP1Q9H5V8 836 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 TMEM231Q9H6L2 316 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 UPF2Q9HAU5 1272 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 LZTFL1Q9NQ48 299 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 YAE1D1Q9NRH1 226 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 SEMA5BQ9P283 1151 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 ONECUT1Q9UBC0 465 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 PEF1Q9UBV8 284 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 NKX1-2Q9UD57 310 aaPredicted RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 CD300AQ9UGN4 299 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 SLC25A13Q9UJS0 675 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 PACSIN2Q9UNF0 486 aaPredicted RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 PLCL2Q9UPR0 1127 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 FOXA2Q9Y261 457 aaPredicted RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 MRPS33Q9Y291 106 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 MAU2Q9Y6X3 613 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 UTYO14607 1347 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 ZNF541Q9H0D2 1346 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 HEG1Q9ULI3 1381 aa4.12□□□□□ -1.75
SMARCA5-202ENST00000508573 FEZF1A0PJY2 475 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 ARHGEF35A5YM69 484 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 CBY3A6NI87 242 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 GABRR3A8MPY1 467 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 CLDN4O14493 209 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 ZNF208O43345 1280 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 CCNT1O60563 726 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TRIM3O75382 744 aaPredicted RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 OPN1LWP04000 364 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 HIST1H2ABP04908 130 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 ICAM1P05362 532 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 FESP07332 822 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 SERPINF2P08697 491 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 F3P13726 295 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 SLC2A4P14672 509 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 SRMP19623 302 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 HIST1H2ADP20671 130 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 UCP1P25874 307 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 GSTM2P28161 218 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TYK2P29597 1187 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 FCGR2BP31994 310 aaPredicted RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 DLSTP36957 453 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 FNTAP49354 379 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 RPS7P62081 194 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 OTUD4Q01804 1114 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 ROR2Q01974 943 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 SPOCK1Q08629 439 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 DMPKQ09013 629 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 RASGEF1BQ0VAM2 473 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 FUT7Q11130 342 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 HSPB3Q12988 150 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 GRIK3Q13003 919 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 PTPRRQ15256 657 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 PCK2Q16822 640 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 ADPRMQ3LIE5 342 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TMEM119Q4V9L6 283 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 FAM98BQ52LJ0 330 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 LRRC73Q5JTD7 316 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TMEM63BQ5T3F8 832 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 LRRC38Q5VT99 294 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 C8orf74Q6P047 294 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 FAM173BQ6P4H8 233 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 TTC23LQ6PF05 361 aa4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 PRSS55Q6UWB4 352 aaPredicted RBP4.11□□□□□ -1.75
SMARCA5-202ENST00000508573 QSOX2Q6ZRP7 698 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms