RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 FBXL5Q9UKA1 691 aa3.79□□□□□ -1.8
TRAPPC13-209ENST00000508304 RNF150Q9ULK6 438 aa3.79□□□□□ -1.8
TRAPPC13-209ENST00000508304 TRIM17Q9Y577 477 aa3.79□□□□□ -1.8
TRAPPC13-209ENST00000508304 A0A1W2PPM1 405 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 C5orf60A6NFR6 353 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 PLOD2O00469 737 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 AP5Z1O43299 807 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 GPR137BO60478 399 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 SORBS2O94875 1100 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 GCNT3O95395 438 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 ACSL3O95573 720 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 CD48P09326 243 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 EPHA2P29317 976 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 HPDP32754 393 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 KIF5BP33176 963 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 MAP2K2P36507 400 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 CASP3P42574 277 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZNF131P52739 623 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 RPS18P62269 152 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 GAGE2BQ13066 116 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 PPA1Q15181 289 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 KIAA1644Q3SXP7 199 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 GAGE2EQ4V326 116 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 SLC39A12Q504Y0 691 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 IFI44LQ53G44 452 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 GCNT6Q5T4J0 391 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 GAGE2AQ6NT46 116 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 SH2D5Q6ZV89 423 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 TMPRSS11FQ6ZWK6 438 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 NUP54Q7Z3B4 507 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 GPALPP1Q8IXQ4 340 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 AMER3Q8N944 861 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 SEMA4DQ92854 862 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 PDLIM5Q96HC4 596 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 KLHL5Q96PQ7 755 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 GAL3ST4Q96RP7 486 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 CPNE1Q99829 537 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 RBM4BQ9BQ04 359 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 RHNO1Q9BSD3 238 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 SPXQ9BT56 116 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 IARS2Q9NSE4 1012 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 PDRG1Q9NUG6 133 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 DNAJC17Q9NVM6 304 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 CNIH4Q9P003 139 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 GAGE2DQ9UEU5 116 aa3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 MTF2Q9Y483 593 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-209ENST00000508304 SPAG9O60271 1321 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 RNF103-CHMP3A0A140T963 221 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 C13orf42A0A1B0GVH6 325 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 RNF103O00237 685 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 SLC30A4O14863 429 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 TO15178 435 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 ST8SIA3O43173 380 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 SEC22BO75396 215 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 SRSF10O75494 262 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 RAD51DO75771 328 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 OLFM2O95897 454 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 TSHBP01222 138 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 GH1P01241 217 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 DANCRP0C864 163 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 SPP1P10451 314 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 EEF2P13639 858 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 DPEP1P16444 411 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 CCND3P30281 292 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 HSD17B3P37058 310 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 MMP15P51511 669 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 MAPK12P53778 367 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 TPD52P55327 224 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 KIAA1024LP59773 190 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 POLR2FP61218 127 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 POLR2LP62875 67 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 IL1RL1Q01638 556 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 GFPT1Q06210 699 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 TMEM187Q14656 261 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 MAPK11Q15759 364 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 CDO1Q16878 200 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 TMEM182Q6ZP80 229 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 FAM114A1Q8IWE2 563 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 RYBPQ8N488 228 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 DDHD1Q8NEL9 900 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 TMEM143Q96AN5 459 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 THOC1Q96FV9 657 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 ZNF582Q96NG8 517 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 NAP1L5Q96NT1 182 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 LRRC3BQ96PB8 259 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 RUFY1Q96T51 708 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 GFI1Q99684 422 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 VGLL1Q99990 258 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 C16orf70Q9BSU1 422 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 PI4K2AQ9BTU6 479 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 LMF2Q9BU23 707 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 CACNG6Q9BXT2 260 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 PRRG4Q9BZD6 226 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 LSG1Q9H089 658 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 C1orf21Q9H246 121 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 DPAGT1Q9H3H5 408 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 ANO10Q9NW15 660 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 HPF1Q9NWY4 346 aa3.77□□□□□ -1.81
TRAPPC13-209ENST00000508304 COMMD8Q9NX08 183 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms