RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 STX6O43752 255 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 TRMUO75648 421 aaKnown RBP3.07□□□□□ -1.92
LSM6-205ENST00000507449 AMBPP02760 352 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 EDN1P05305 212 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 DLATP10515 647 aaKnown RBP3.07□□□□□ -1.92
LSM6-205ENST00000507449 F3P13726 295 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 MYL6BP14649 208 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 MAP2K2P36507 400 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 OR3A1P47881 315 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 ADARP55265 1226 aaKnown RBP3.07□□□□□ -1.92
LSM6-205ENST00000507449 FOLH1Q04609 750 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 ZNF674Q2M3X9 581 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 PDLIM3Q53GG5 364 aaPredicted RBP3.07□□□□□ -1.92
LSM6-205ENST00000507449 KLHL22Q53GT1 634 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 SLC10A5Q5PT55 438 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 FAM46CQ5VWP2 391 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 TMEM207Q6UWW9 146 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 AMIGO1Q86WK6 493 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 KLHDC8BQ8IXV7 354 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 CCDC170Q8IYT3 715 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 OR13C3Q8NGS6 347 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 NCOA7Q8NI08 942 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 PIK3R3Q92569 461 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 DYRK2Q92630 601 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 TSACCQ96A04 125 aaPredicted RBP3.07□□□□□ -1.92
LSM6-205ENST00000507449 SGF29Q96ES7 293 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 C10orf90Q96M02 699 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 TMEM206Q9H813 350 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 RAVER2Q9HCJ3 691 aaKnown RBP3.07□□□□□ -1.92
LSM6-205ENST00000507449 CHST11Q9NPF2 352 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 PKD2L2Q9NZM6 624 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 CNIH4Q9P003 139 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 CHKBQ9Y259 395 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 SNURFLB1AK76 121 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 H0YIG0 161 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 CTDSPLO15194 276 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 GLRA3O75311 464 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 CDK2AP2O75956 126 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 SLC16A8O95907 504 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 ATP1B1P05026 303 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 SP1P08047 785 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 CFC1BP0CG36 223 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 CFC1P0CG37 223 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 CEACAM1P13688 526 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 GNB3P16520 340 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 ALDH4A1P30038 563 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 CCND3P30281 292 aaPredicted RBP3.06□□□□□ -1.92
LSM6-205ENST00000507449 COPB2P35606 906 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 MAGEA11P43364 429 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 GNB1P62873 340 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 SP3Q02447 781 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 SULT2A1Q06520 285 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 RBM39Q14498 530 aaKnown RBP3.06□□□□□ -1.92
LSM6-205ENST00000507449 RBBP7Q16576 425 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 GTDC1Q4AE62 458 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 IQCCQ4KMZ1 466 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 ARHGEF16Q5VV41 709 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 OR4C11Q6IEV9 310 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 ZNF449Q6P9G9 518 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 CTR9Q6PD62 1173 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 BTN2A1Q7KYR7 527 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 CPEB2Q7Z5Q1 589 aaKnown RBP3.06□□□□□ -1.92
LSM6-205ENST00000507449 PIGWQ7Z7B1 504 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 IQCA1Q86XH1 822 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 MARVELD2Q8N4S9 558 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 OR7G3Q8NG95 312 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 OR1L3Q8NH93 324 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 GRK7Q8WTQ7 553 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 TMEM190Q8WZ59 177 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 WBP2Q969T9 261 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 CENPTQ96BT3 561 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 GIMAP5Q96F15 307 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 PGM2Q96G03 612 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 RBM41Q96IZ5 413 aaKnown RBP3.06□□□□□ -1.92
LSM6-205ENST00000507449 F2RL3Q96RI0 385 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 EPYCQ99645 322 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 UTP14AQ9BVJ6 771 aaKnown RBP3.06□□□□□ -1.92
LSM6-205ENST00000507449 CDK19Q9BWU1 502 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 CACNG6Q9BXT2 260 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 DNAI2Q9GZS0 605 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 ZNF350Q9GZX5 532 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 SDCBP2Q9H190 292 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 RIMS4Q9H426 269 aaPredicted RBP3.06□□□□□ -1.92
LSM6-205ENST00000507449 SLCO1C1Q9NYB5 712 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 WWOXQ9NZC7 414 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 OR6C2Q9NZP2 312 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 DISP3Q9P2K9 1392 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 NOCTQ9UK39 431 aaKnown RBP3.06□□□□□ -1.92
LSM6-205ENST00000507449 GRID1Q9ULK0 1009 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 GPR132Q9UNW8 380 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 C2CD2Q9Y426 696 aa3.06□□□□□ -1.92
LSM6-205ENST00000507449 A0A087X002 238 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 A0A0G2JLW4 131 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 FAM72CH0Y354 149 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 H3BMM5 538 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 KHDRBS3O75525 346 aaKnown RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 CDC123O75794 336 aaPredicted RBP3.05□□□□□ -1.92
LSM6-205ENST00000507449 AP2A2O94973 939 aa3.05□□□□□ -1.92
LSM6-205ENST00000507449 CAVIN2O95810 425 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms