RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CTSVO60911 334 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 NDST3O95803 873 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 FPR1P21462 350 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 IL1R2P27930 398 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 TPP2P29144 1249 aaPredicted RBP6.76□□□□□ -1.33
VCAN-207ENST00000507162 PTH2RP49190 550 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 MAT1AQ00266 395 aaKnown RBP6.76□□□□□ -1.33
VCAN-207ENST00000507162 GALNT2Q10471 571 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 KRT81Q14533 505 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 HSPB2Q16082 182 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 EXT1Q16394 746 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 ACKR1Q16570 336 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 MINDY4Q4G0A6 757 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 BOLA3Q53S33 107 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 RIPPLY2Q5TAB7 128 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 ZNF227Q86WZ6 799 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 TBC1D21Q8IYX1 336 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 MCOLN2Q8IZK6 566 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 FMR1NBQ8N0W7 255 aaPredicted RBP6.76□□□□□ -1.33
VCAN-207ENST00000507162 SLC25A41Q8N5S1 370 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 CNTD1Q8N815 330 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 ZNF454Q8N9F8 522 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 SPATA22Q8NHS9 363 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 DTX3LQ8TDB6 740 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 ROBO4Q8WZ75 1007 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 CAPZA3Q96KX2 299 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 ZNF285Q96NJ3 590 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 CEP41Q9BYV8 373 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 TRIM7Q9C029 511 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 VN1R1Q9GZP7 353 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 EPB41L4BQ9H329 900 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 NDST4Q9H3R1 872 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 LDAHQ9H6V9 325 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 ASB8Q9H765 288 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 EXO5Q9H790 373 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 PCDH18Q9HCL0 1135 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 PARVAQ9NVD7 372 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 UBP1Q9NZI7 540 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 C19orf25Q9UFG5 118 aaPredicted RBP6.76□□□□□ -1.33
VCAN-207ENST00000507162 CIDEBQ9UHD4 219 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 FOXD3Q9UJU5 478 aaPredicted RBP6.76□□□□□ -1.33
VCAN-207ENST00000507162 NPFFR2Q9Y5X5 522 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 DUSP10Q9Y6W6 482 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 FAM169AQ9Y6X4 670 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 DSCAMO60469 2012 aa6.76□□□□□ -1.33
VCAN-207ENST00000507162 A0A0A6YYC8 382 aaPredicted RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 A0A0G2JK05 382 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 TMEM191CA6NGB0 347 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 TMCO5BA8MYB1 307 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 CFAP99D6REC4 459 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 I3L1I5 382 aaPredicted RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 GAPDHSO14556 408 aaPredicted RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 STX7O15400 261 aaKnown RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 CD5LO43866 347 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 KDM1AO60341 852 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 GOSR1O95249 250 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 RARAP10276 462 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 ATP1B2P14415 290 aaPredicted RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 TCF4P15884 667 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 CFPP27918 469 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 SOX5P35711 763 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 SLC26A3P40879 764 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 PRLHRP49683 370 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 HLCSP50747 726 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 AGFG1P52594 562 aaKnown RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 POLR2FP61218 127 aaKnown RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 VEZF1Q14119 521 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 MAN2A1Q16706 1144 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 TPD52L1Q16890 204 aaPredicted RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 WIPI1Q5MNZ9 446 aaPredicted RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 WLSQ5T9L3 541 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 C12orf54Q6X4T0 127 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 GLT6D1Q7Z4J2 308 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 ANKRD37Q7Z713 158 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 ZC3H7AQ8IWR0 971 aaKnown RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 AMER3Q8N944 861 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 ZFP62Q8NB50 900 aaPredicted RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 PPP1R14CQ8TAE6 165 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 BLOC1S5Q8TDH9 187 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 ZUFSPQ96AP4 578 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 C10orf90Q96M02 699 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 TSGA13Q96PP4 275 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 TGIF2Q9GZN2 237 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 TRABDQ9H4I3 376 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 FAM96AQ9H5X1 160 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 MMP25Q9NPA2 562 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 LUC7LQ9NQ29 371 aaKnown RBP6.75□□□□□ -1.33
VCAN-207ENST00000507162 CRLS1Q9UJA2 301 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 DYSFO75923 2080 aa6.75□□□□□ -1.33
VCAN-207ENST00000507162 OR14I1A6ND48 311 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 EEF1E1-BLOC1S5C9J1V9 151 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 EEF1E1O43324 174 aaKnown RBP6.74□□□□□ -1.33
VCAN-207ENST00000507162 WDR1O75083 606 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 AP2A1O95782 977 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 HSP90AA1P07900 732 aaKnown RBP6.74□□□□□ -1.33
VCAN-207ENST00000507162 ATP1A3P13637 1013 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 EGR1P18146 543 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 ATP5J2P56134 94 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 ZBTB17Q13105 803 aa6.74□□□□□ -1.33
VCAN-207ENST00000507162 RPA4Q13156 261 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms