RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 NXPE4Q6UWF7 544 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 SLCO4C1Q6ZQN7 724 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 LRRC70Q7Z2Q7 622 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 KMT5CQ86Y97 462 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 CACTIN-AS1Q8N1I8 211 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 DNAJC22Q8N4W6 341 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 ZNF740Q8NDX6 193 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 MGARPQ8TDB4 240 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 TCTN2Q96GX1 697 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 PKNOX2Q96KN3 472 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 ATP6V1G3Q96LB4 118 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 OR6C1Q96RD1 312 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 CMKLR1Q99788 373 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 SELENOSQ9BQE4 189 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 PDE7BQ9NP56 450 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 SIDT1Q9NXL6 827 aaKnown RBP12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 AKAP7Q9P0M2 348 aaPredicted RBP12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 COPG2Q9UBF2 871 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 PCTPQ9UKL6 214 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 TMCO1Q9UM00 188 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 SNX7Q9UNH6 387 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 BTRCQ9Y297 605 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 ANGPTL3Q9Y5C1 460 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 ACTL7BQ9Y614 415 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 KCNE2Q9Y6J6 123 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 KNTC1P50748 2209 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 FRYQ5TBA9 3013 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 LOC105369274A0A096LPK9 316 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 LOC102723532A0A0G2JNH3 316 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 TMEM120BA0PK00 339 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 OR2A25A4D2G3 310 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 TMEM150CB9EJG8 249 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 PPP6CO00743 305 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 PLD2O14939 933 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 CLGNO14967 610 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 LCMT2O60294 686 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 RPS17P08708 135 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 JMJD7P0C870 316 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 C1GALT1C1LP0DN25 315 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 GABRA4P48169 554 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 GABREP78334 506 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 MC2RQ01718 297 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 ZNF678Q5SXM1 525 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 PRAMEF17Q5VTA0 474 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 FRMPD2BQ6IN97 320 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 MCATQ8IVS2 390 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 OR4N4Q8N0Y3 316 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 CARFQ8N187 725 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 CCNYL1Q8N7R7 359 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 GOLGA6L1Q8N7Z2 621 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 BMPERQ8N8U9 685 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 WDR36Q8NI36 951 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 ZNF483Q8TF39 744 aaPredicted RBP12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 USP7Q93009 1102 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 COL26A1Q96A83 441 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 ZUFSPQ96AP4 578 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 SPRTNQ9H040 489 aaPredicted RBP12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 NOL11Q9H8H0 719 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 ZBTB26Q9HCK0 441 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 SSU72Q9NP77 194 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 SEMA4BQ9NPR2 832 aaPredicted RBP12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 FGF21Q9NSA1 209 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 STARD5Q9NSY2 213 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 TMEM184CQ9NVA4 438 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 SLC39A1Q9NY26 324 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 PILRAQ9UKJ1 303 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 TNPO3Q9Y5L0 923 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 SPEGQ15772 3267 aa12.72□□□□□ -0.37
PDLIM7-212ENST00000504380 A0A1B0GTL3 188 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 TRABD2BA6NFA1 517 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 OR7A17O14581 309 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 PRPF4O43172 522 aaKnown RBP eCLIP12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 KATNA1O75449 491 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 SUPT7LO94864 414 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 TNFSF15O95150 251 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 FKBP9O95302 570 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 TIAF1O95411 115 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 EPB42P16452 691 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 CD22P20273 847 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 IMPDH1P20839 514 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 HPDP32754 393 aaPredicted RBP12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 BCL6P41182 706 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 ETV4P43268 484 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 CCR8P51685 355 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 NAGLUP54802 743 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 VSX2P58304 361 aaPredicted RBP12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 HERVK_113P63132 956 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 NFKB2Q00653 900 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 CHIT1Q13231 466 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 TUBB3Q13509 450 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 DOC2AQ14183 400 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 SLBPQ14493 270 aaKnown RBP eCLIP12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 XKR6Q5GH73 641 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 TMTC4Q5T4D3 741 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 ZCCHC23Q6ZST2 131 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 SLC22A9Q8IVM8 553 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 ABHD11Q8NFV4 315 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 OR1L3Q8NH93 324 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 RDH11Q8TC12 318 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms