RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SNRNP25Q9BV90 132 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TKTL2Q9H0I9 626 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM168Q9H0V1 697 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 MIEF1Q9NQG6 463 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 PRDM7Q9NQW5 492 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 TBC1D13Q9NVG8 400 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 GRHL1Q9NZI5 618 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 PCYOX1Q9UHG3 505 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 ELF5Q9UKW6 265 aaPredicted RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 UBQLN1Q9UMX0 589 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 AAR2Q9Y312 384 aaKnown RBP3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 ADGRA3Q8IWK6 1321 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 A0A0C4DFX4 3053 aa3.58□□□□□ -1.84
PCDH11X-208ENST00000504220 SVILO95425 2214 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 A0A1W2PPC1 479 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 OR2W5A6NFC9 320 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 KDM4EB2RXH2 506 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 H0YAE9 185 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 H3BRB1 525 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PSMD3O43242 534 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TGFB1I1O43294 461 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RFPL2O75678 378 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CPNE6O95741 557 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ONECUT2O95948 504 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PGK1P00558 417 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 FGBP02675 491 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 JUNP05412 331 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CKMT2P17540 419 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 NFKB1P19838 968 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 NOS2P35228 1153 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 GGT5P36269 586 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 YAP1P46937 504 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 FLT3LGP49771 235 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RABGGTBP53611 331 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CDH15P55291 814 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 FCGRTP55899 365 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 LGALS3BPQ08380 585 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SCARB2Q14108 478 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CTF1Q16619 201 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DPY19L1Q2PZI1 675 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RFX4Q33E94 735 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 USP39Q53GS9 565 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TEX30Q5JUR7 227 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 KIAA0319Q5VV43 1072 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ANKRD22Q5VYY1 191 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 LIPJQ5W064 366 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 KANK2Q63ZY3 851 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF852Q6ZMS4 543 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C1orf186Q6ZWK4 172 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 USP53Q70EK8 1073 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TRILQ7L0X0 811 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DET1Q7L5Y6 550 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 EFL1Q7Z2Z2 1120 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TRMT11Q7Z4G4 463 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C5orf24Q7Z6I8 188 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 LGI2Q8N0V4 545 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CELF2-AS1Q8N7Q2 184 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM102Q8N9M5 508 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CPEB3Q8NE35 698 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR156Q8NFN8 814 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 OR6K2Q8NGY2 324 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ZFP90Q8TF47 636 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CENPIQ92674 756 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 IGSF21Q96ID5 467 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ZFP42Q96MM3 310 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 KLHL5Q96PQ7 755 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 MRPL45Q9BRJ2 306 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 WDR18Q9BV38 432 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RHOBTB2Q9BYZ6 727 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PRRG3Q9BZD7 231 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 OR51M1Q9H341 326 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PDZD7Q9H5P4 517 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 STN1Q9H668 368 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 LDAHQ9H6V9 325 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TXNRD2Q9NNW7 524 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SERHLQ9NQF3 203 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 FBXO8Q9NRD0 319 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ABCC13Q9NSE7 274 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TRMT13Q9NUP7 481 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF358Q9NW07 568 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ELOVL2Q9NXB9 296 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 KCNK4Q9NYG8 393 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CACNG4Q9UBN1 327 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ANAPC2Q9UJX6 822 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR55Q9Y2T6 319 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ASTN1O14525 1302 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CACNA1GO43497 2377 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 LRRC37A2A6NM11 1700 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 NEDD8-MDP1E9PL57 170 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DVL2O14641 736 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DCLK1O15075 740 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC31A2O15432 143 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 B4GALT5O43286 388 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 AKR7A2O43488 359 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C2P06681 752 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 BMP4P12644 408 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CHRNB2P17787 502 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PTBP1P26599 531 aaKnown RBP eCLIP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 S100A3P33764 101 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DDOSTP39656 456 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms