RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 SELENOSQ9BQE4 189 aa15.8■□□□□ 0.12
SCLT1-205ENST00000503401 ROPN1BQ9BZX4 212 aaPredicted RBP15.8■□□□□ 0.12
SCLT1-205ENST00000503401 CNOT10Q9H9A5 744 aaKnown RBP15.8■□□□□ 0.12
SCLT1-205ENST00000503401 ROPN1Q9HAT0 212 aaPredicted RBP15.8■□□□□ 0.12
SCLT1-205ENST00000503401 SERTAD3Q9UJW9 196 aa15.8■□□□□ 0.12
SCLT1-205ENST00000503401 PILRAQ9UKJ1 303 aa15.8■□□□□ 0.12
SCLT1-205ENST00000503401 SNX7Q9UNH6 387 aa15.8■□□□□ 0.12
SCLT1-205ENST00000503401 DYRK1BQ9Y463 629 aa15.8■□□□□ 0.12
SCLT1-205ENST00000503401 E7EQ34 232 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 STMND1H3BQB6 276 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 STK16O75716 305 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 STATHP02808 62 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 SBK3P0C264 359 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 KRT4P19013 534 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 VSX2P58304 361 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 CSNK1G2P78368 415 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 NAA25Q14CX7 972 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 KRT71Q3SY84 523 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 ZC3H12BQ5HYM0 836 aaKnown RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 RNF44Q7L0R7 432 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 TIPARPQ7Z3E1 657 aaKnown RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 TMPRSS11BQ86T26 416 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 BPHLQ86WA6 291 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 KLHDC8AQ8IYD2 350 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 IQCKQ8N0W5 287 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 RIBC1Q8N443 379 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 TMEM151AQ8N4L1 468 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 ZNF655Q8N720 491 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 SLC38A9Q8NBW4 561 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 GALNT6Q8NCL4 622 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 SNIP1Q8TAD8 396 aaKnown RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 SLC5A11Q8WWX8 675 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 PHF21BQ96EK2 531 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 MRPL57Q9BQC6 102 aaKnown RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 CD244Q9BZW8 370 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 SPRY4Q9C004 299 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 B3GNT4Q9C0J1 378 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 SPNS1Q9H2V7 528 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 MRPL46Q9H2W6 279 aaKnown RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 TMEM184CQ9NVA4 438 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 ANKMY1Q9P2S6 941 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 LGALS13Q9UHV8 139 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 ZNF749O43361 778 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 IPO13O94829 963 aaKnown RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 SIX3O95343 332 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 EIF2S1P05198 315 aaKnown RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 ATXN8OSP0DMR3 200 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 GPR135Q8IZ08 494 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 PTGR2Q8N8N7 351 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 SNX31Q8N9S9 440 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 KDF1Q8NAX2 398 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 OR8K5Q8NH50 307 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 TMEM109Q9BVC6 243 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 C12orf65Q9H3J6 166 aaKnown RBP15.79■□□□□ 0.12
SCLT1-205ENST00000503401 DNAJC11Q9NVH1 559 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 ACSL6Q9UKU0 697 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 KCNE2Q9Y6J6 123 aa15.79■□□□□ 0.12
SCLT1-205ENST00000503401 CCDC189A1A4V9 331 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 H0YGG7 62 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 ZSCAN9O15535 394 aaPredicted RBP15.78■□□□□ 0.12
SCLT1-205ENST00000503401 KLK8O60259 260 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 DLGAP3O95886 979 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 EZRP15311 586 aaKnown RBP15.78■□□□□ 0.12
SCLT1-205ENST00000503401 VARSP26640 1264 aaKnown RBP15.78■□□□□ 0.12
SCLT1-205ENST00000503401 CCR8P51685 355 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 ALDH18A1P54886 795 aaKnown RBP15.78■□□□□ 0.12
SCLT1-205ENST00000503401 ARF3P61204 181 aaPredicted RBP15.78■□□□□ 0.12
SCLT1-205ENST00000503401 CDC16Q13042 620 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 SRSF6Q13247 344 aaKnown RBP15.78■□□□□ 0.12
SCLT1-205ENST00000503401 SETDB1Q15047 1291 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 WASHC2DQ5SRD0 308 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 CEP85LQ5SZL2 805 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 TRABD2AQ86V40 505 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 SRRM1Q8IYB3 904 aaKnown RBP15.78■□□□□ 0.12
SCLT1-205ENST00000503401 ZNF248Q8NDW4 579 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 ZNF740Q8NDX6 193 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 ABHD11Q8NFV4 315 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 UBTD2Q8WUN7 234 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 KCNE4Q8WWG9 221 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 OR2A5Q96R48 311 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 AKIRIN1Q9H9L7 192 aaPredicted RBP15.78■□□□□ 0.12
SCLT1-205ENST00000503401 TMEM184BQ9Y519 407 aaPredicted RBP15.78■□□□□ 0.12
SCLT1-205ENST00000503401 USP24Q9UPU5 2620 aa15.78■□□□□ 0.12
SCLT1-205ENST00000503401 TMEM8BA6NDV4 472 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 LCMT2O60294 686 aaKnown RBP15.77■□□□□ 0.12
SCLT1-205ENST00000503401 RAD1O60671 282 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 PRAMEF4O60810 478 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 LIPCP11150 499 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 EPORP19235 508 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 HRH2P25021 359 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 CD82P27701 267 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 EIF2S3P41091 472 aaKnown RBP15.77■□□□□ 0.12
SCLT1-205ENST00000503401 BCL6P41182 706 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 CLN3Q13286 438 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 PDK4Q16654 411 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 PRAMEF9Q5VWM5 478 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 NXPE4Q6UWF7 544 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 LRRC70Q7Z2Q7 622 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 DTX1Q86Y01 620 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 CNPY4Q8N129 248 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms