RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CLHC1Q8NHS4 586 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 C11orf24Q96F05 449 aaPredicted RBP21.21■□□□□ 0.99
PTPN13-205ENST00000502971 RAB11FIP5Q9BXF6 653 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 MVB12BQ9H7P6 319 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 NANOGQ9H9S0 305 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 PELI2Q9HAT8 420 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 HS3ST3A1Q9Y663 406 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 TNFRSF10CO14798 259 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 TACR1P25103 407 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 CLCA4Q14CN2 919 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 DUS1LQ6P1R4 473 aaKnown RBP21.21■□□□□ 0.99
PTPN13-205ENST00000502971 C17orf64Q86WR6 236 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 RIMKLAQ8IXN7 391 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 UBALD2Q8IYN6 164 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 KRT78Q8N1N4 520 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 FLCNQ8NFG4 579 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 NUDT8Q8WV74 236 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 CHTF18Q8WVB6 975 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 GTF2H4Q92759 462 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 ZUFSPQ96AP4 578 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 SH3KBP1Q96B97 665 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 CAMK1GQ96NX5 476 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 TSSK3Q96PN8 268 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 MUC13Q9H3R2 512 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 IMP3Q9NV31 184 aaKnown RBP21.21■□□□□ 0.99
PTPN13-205ENST00000502971 HEBP2Q9Y5Z4 205 aa21.21■□□□□ 0.99
PTPN13-205ENST00000502971 PDZK1P1A8MUH7 402 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 C8BP07358 591 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 CDH1P12830 882 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 PRPS1L1P21108 318 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 S100A3P33764 101 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 PIK3CBP42338 1070 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 CCR5P51681 352 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 C21orf58P58505 322 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 RPS13P62277 151 aaKnown RBP21.2■□□□□ 0.98
PTPN13-205ENST00000502971 LRRC32Q14392 662 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 KRT33BQ14525 404 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 DPY19L1Q2PZI1 675 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 GCNT7Q6ZNI0 430 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 MSANTD1Q6ZTZ1 278 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 SPATA24Q86W54 205 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 DHFR2Q86XF0 187 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 FAM129CQ86XR2 697 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 SYT12Q8IV01 421 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 ZNF687Q8N1G0 1237 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 C2orf73Q8N5S3 287 aaPredicted RBP21.2■□□□□ 0.98
PTPN13-205ENST00000502971 OR1E3Q8WZA6 343 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 RSRC1Q96IZ7 334 aaKnown RBP21.2■□□□□ 0.98
PTPN13-205ENST00000502971 TMEM74Q96NL1 305 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 OR52E6Q96RD3 313 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 CGREF1Q99674 301 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 SIRT5Q9NXA8 310 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 TAC3Q9UHF0 121 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 MAPRE3Q9UPY8 281 aa21.2■□□□□ 0.98
PTPN13-205ENST00000502971 DNAJA2O60884 412 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 ETHE1O95571 254 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 CXCR2P25025 360 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 RAB28P51157 221 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 MRPS22P82650 360 aaKnown RBP21.19■□□□□ 0.98
PTPN13-205ENST00000502971 TMEM31Q5JXX7 168 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 ADNP2Q6IQ32 1131 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 OR8J3Q8NGG0 315 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 STARD8Q92502 1023 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 SHDQ96IW2 340 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 HHIPQ96QV1 700 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 EBPLQ9BY08 206 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 TRIM15Q9C019 465 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 ALG2Q9H553 416 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 RMND5AQ9H871 391 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 PRM3Q9NNZ6 103 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 WASH6PQ9NQA3 447 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 DMRT3Q9NQL9 472 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 C6orf203Q9P0P8 240 aaPredicted RBP21.19■□□□□ 0.98
PTPN13-205ENST00000502971 ADGRE2Q9UHX3 823 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 PPT2Q9UMR5 302 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 CA5BQ9Y2D0 317 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 LRRC42Q9Y546 428 aa21.19■□□□□ 0.98
PTPN13-205ENST00000502971 H0Y8X5 98 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 NVLO15381 856 aaKnown RBP21.18■□□□□ 0.98
PTPN13-205ENST00000502971 KDM1AO60341 852 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 OXTRP30559 389 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 ATXN3P54252 364 aaPredicted RBP21.18■□□□□ 0.98
PTPN13-205ENST00000502971 YBX1P67809 324 aaKnown RBP21.18■□□□□ 0.98
PTPN13-205ENST00000502971 RHDQ02161 417 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 LIPEQ05469 1076 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 RPE65Q16518 533 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 RABL3Q5HYI8 236 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 WASH2PQ6VEQ5 465 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 RNF111Q6ZNA4 994 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 ABHD11Q8NFV4 315 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 DUS3LQ96G46 650 aaKnown RBP21.18■□□□□ 0.98
PTPN13-205ENST00000502971 PDXPQ96GD0 296 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 LRGUKQ96M69 825 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 PITHD1Q9GZP4 211 aaPredicted RBP21.18■□□□□ 0.98
PTPN13-205ENST00000502971 LMAN1LQ9HAT1 526 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 MRPS17Q9Y2R5 130 aaKnown RBP21.18■□□□□ 0.98
PTPN13-205ENST00000502971 A0A1W2PPV9 198 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 PKLRP30613 574 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 ASMTP46597 345 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 SRSF11Q05519 484 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms