RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 DHODHQ02127 395 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 CALD1Q05682 793 aaKnown RBP2.07□□□□□ -2.08
SMAD1-203ENST00000502342 PAX8Q06710 450 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 TRIM29Q14134 588 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 OPCMLQ14982 345 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 FAM189A2Q15884 450 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 GPR33Q49SQ1 333 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 TCTEX1D4Q5JR98 221 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 NAA16Q6N069 864 aaPredicted RBP2.07□□□□□ -2.08
SMAD1-203ENST00000502342 ZNF774Q6NX45 483 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 FRRS1Q6ZNA5 592 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 ENOSF1Q7L5Y1 443 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 CDC20BQ86Y33 519 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 MFN1Q8IWA4 741 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 ANKRD13CQ8N6S4 541 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 AQP11Q8NBQ7 271 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 PRSS33Q8NF86 280 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 OR10Q1Q8NGQ4 319 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 C9orf43Q8TAL5 461 aaPredicted RBP2.07□□□□□ -2.08
SMAD1-203ENST00000502342 C11orf45Q8TAV5 145 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 ATXN7L3BQ96GX2 97 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 SLC45A3Q96JT2 553 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 PRICKLE1Q96MT3 831 aaPredicted RBP2.07□□□□□ -2.08
SMAD1-203ENST00000502342 GAL3ST4Q96RP7 486 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 RAB11FIP5Q9BXF6 653 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 SLC2A11Q9BYW1 496 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 HOXD1Q9GZZ0 328 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 GPN1Q9HCN4 374 aaPredicted RBP2.07□□□□□ -2.08
SMAD1-203ENST00000502342 SLC7A10Q9NS82 523 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 NDE1Q9NXR1 346 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 BCCIPQ9P287 314 aaKnown RBP eCLIP2.07□□□□□ -2.08
SMAD1-203ENST00000502342 BAIAP2L1Q9UHR4 511 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 ANAPC2Q9UJX6 822 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 CSAG2Q9Y5P2 127 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 PASKQ96RG2 1323 aa2.07□□□□□ -2.08
SMAD1-203ENST00000502342 LOC105371242A0A075B767 164 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 IGHV3OR16-10A0A075B7F0 116 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 IGKV6D-41A0A0C4DH26 115 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 TRBV4-1A0A0J9YWV2 114 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 TRBV5-5A0A0J9YX44 114 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 SYNDIG1LA6NDD5 238 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 A8MXK9 166 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 O00370 1275 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 CLDN4O14493 209 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 HPRP00739 348 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 IGHV3-13P01766 116 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 ATP5BP06576 529 aaKnown RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 NR2F1P10589 423 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 AKR1B1P15121 316 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 CYP11B2P19099 503 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 HSD17B3P37058 310 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 RBPJQ06330 500 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 RASGEF1BQ0VAM2 473 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 ILF2Q12905 390 aaKnown RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 PEX6Q13608 980 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 BECN1Q14457 450 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 TAB1Q15750 504 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 NPTX1Q15818 432 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 TMEM266Q2M3C6 531 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 FGD3Q5JSP0 725 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 ARMC4Q5T2S8 1044 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 LCLAT1Q6UWP7 414 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 LEKR1Q6ZMV7 388 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 BRINP3Q76B58 766 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 FCRLAQ7L513 359 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 ERC1Q8IUD2 1116 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 Q8N377 158 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 FAM89BQ8N5H3 189 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 TCEANCQ8N8B7 351 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 AMER3Q8N944 861 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 RASGEF1AQ8N9B8 481 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 TDRD5Q8NAT2 981 aaKnown RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 OR4D10Q8NGI6 311 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 MIPOL1Q8TD10 442 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 PIK3R3Q92569 461 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 TSACCQ96A04 125 aaPredicted RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 HDAC11Q96DB2 347 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 CNRIP1Q96F85 164 aaPredicted RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 PGM2Q96G03 612 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 PDLIM5Q96HC4 596 aaKnown RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 LINC00615Q96LM1 132 aaPredicted RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 C2orf48Q96LS8 159 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 MAP3K3Q99759 626 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 TDRD1Q9BXT4 1180 aaKnown RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 TRIM6Q9C030 488 aaPredicted RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 SNX25Q9H3E2 840 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 Q9H8V8 135 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 XAB2Q9HCS7 855 aaKnown RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 CCDC177Q9NQR7 707 aaPredicted RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 LNPEPQ9UIQ6 1025 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 PRDM4Q9UKN5 801 aa2.06□□□□□ -2.08
SMAD1-203ENST00000502342 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.06□□□□□ -2.08
SMAD1-203ENST00000502342 TRAV24A0A0B4J272 114 aa2.05□□□□□ -2.08
SMAD1-203ENST00000502342 EPM2AB3EWF7 344 aa2.05□□□□□ -2.08
SMAD1-203ENST00000502342 CCL24O00175 119 aa2.05□□□□□ -2.08
SMAD1-203ENST00000502342 PTGESO14684 152 aa2.05□□□□□ -2.08
SMAD1-203ENST00000502342 AP5Z1O43299 807 aa2.05□□□□□ -2.08
SMAD1-203ENST00000502342 CELF2O95319 508 aaKnown RBP2.05□□□□□ -2.08
SMAD1-203ENST00000502342 POP4O95707 220 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms