RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 DSPP15924 2871 aaKnown RBP12.24□□□□□ -0.45
HSPG2-213ENST00000498495 A0A1B0GX78 115 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 TXNDC9O14530 226 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 ACSL3O95573 720 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 RHOXF2BP0C7M4 288 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 GRK3P35626 688 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 GCGRP47871 477 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 ATP6V0D1P61421 351 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 CDKL1Q00532 357 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 SLC9A5Q14940 896 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 SLMAPQ14BN4 828 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.454e-8■■■■■ 27.9
HSPG2-213ENST00000498495 TSNQ15631 228 aaKnown RBP12.23□□□□□ -0.45
HSPG2-213ENST00000498495 UAP1Q16222 522 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-213ENST00000498495 UGT8Q16880 541 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 ZXDCQ2QGD7 858 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-213ENST00000498495 MUM1Q2TAK8 710 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 PLD3Q8IV08 490 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 CSNK1A1LQ8N752 337 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 THAP4Q8WY91 577 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 CABS1Q96KC9 395 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 RHOXF2Q9BQY4 288 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 NFU1Q9UMS0 254 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 OARD1Q9Y530 152 aa12.23□□□□□ -0.45
HSPG2-213ENST00000498495 HAT1O14929 419 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 WISP3O95389 354 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-213ENST00000498495 PRB1P04280 392 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 FAM87AP0C7U9 286 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 CD1DP15813 335 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 CRABP2P29373 138 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 ECHS1P30084 290 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 OR1D4P47884 311 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 HNMTP50135 292 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 CCR8P51685 355 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 EMP3P54852 163 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 POLE2P56282 527 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 RPS15AP62244 130 aaKnown RBP12.22□□□□□ -0.45
HSPG2-213ENST00000498495 CSNK1G2P78368 415 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 NFKB2Q00653 900 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 CSHL1Q14406 222 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 SSPNQ14714 243 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 ZKSCAN8Q15776 578 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-213ENST00000498495 PPP1R3AQ16821 1122 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 MROH9Q5TGP6 573 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 FAM69BQ5VUD6 431 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 OVCH1Q7RTY7 1134 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 COL26A1Q96A83 441 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 PTERQ96BW5 349 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 THAP11Q96EK4 314 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 ACSS3Q9H6R3 686 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 ZNF304Q9HCX3 659 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 GEMIN8Q9NWZ8 242 aaKnown RBP12.22□□□□□ -0.45
HSPG2-213ENST00000498495 CDC14AQ9UNH5 594 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 SLC22A14Q9Y267 594 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 MAN2B2Q9Y2E5 1009 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 PTRH2Q9Y3E5 179 aaKnown RBP12.22□□□□□ -0.45
HSPG2-213ENST00000498495 DYRK1BQ9Y463 629 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 KCNMB2Q9Y691 235 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 MAU2Q9Y6X3 613 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 CFAP47Q6ZTR5 3102 aa12.22□□□□□ -0.45
HSPG2-213ENST00000498495 KCNE1BA0A087WTH5 132 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 FEZF1A0PJY2 475 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 NCF1BA6NI72 391 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-213ENST00000498495 NCF1CA8MVU1 366 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-213ENST00000498495 KLF7O75840 302 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-213ENST00000498495 ONECUT2O95948 504 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 ALBP02768 609 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 CDH1P12830 882 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 NCF1P14598 390 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-213ENST00000498495 FOLR3P41439 243 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 C19orf57Q0VDD7 668 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 IL10RAQ13651 578 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 TGFBIQ15582 683 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 NDUFA9Q16795 377 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 HKDC1Q2TB90 917 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 PRTGQ2VWP7 1150 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 GARNL3Q5VVW2 1013 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 MRPL14Q6P1L8 145 aaKnown RBP12.21□□□□□ -0.45
HSPG2-213ENST00000498495 PRMT9Q6P2P2 845 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 CMC1Q7Z7K0 106 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 TBC1D1Q86TI0 1168 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-213ENST00000498495 THOC6Q86W42 341 aaKnown RBP12.21□□□□□ -0.45
HSPG2-213ENST00000498495 GPSM1Q86YR5 675 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 TBC1D19Q8N5T2 526 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 METTL27Q8N6F8 245 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-213ENST00000498495 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-213ENST00000498495 SLC5A11Q8WWX8 675 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 RHBDF1Q96CC6 855 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 UBXN10Q96LJ8 280 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 OR4K3Q96R72 315 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 FUT8Q9BYC5 575 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 SEMA4CQ9C0C4 833 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 ADNPQ9H2P0 1102 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 NMRAL1Q9HBL8 299 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 SLC22A11Q9NSA0 550 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 TLK1Q9UKI8 766 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 SH2B3Q9UQQ2 575 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 RUVBL1Q9Y265 456 aaKnown RBP12.21□□□□□ -0.45
HSPG2-213ENST00000498495 ACOT9Q9Y305 439 aa12.21□□□□□ -0.45
HSPG2-213ENST00000498495 KCNE2Q9Y6J6 123 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms