RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CDK4P11802 303 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 GRK3P35626 688 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 NAA20P61599 178 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 REEP5Q00765 189 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 TRAF3Q13114 568 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 KCNAB1Q14722 419 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 FAM219BQ5XKK7 198 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 ATG9BQ674R7 924 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 FCRL6Q6DN72 434 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 SLCO4C1Q6ZQN7 724 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 GPRIN3Q6ZVF9 776 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 FAM129CQ86XR2 697 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 PLD3Q8IV08 490 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 TRIM42Q8IWZ5 723 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 CARFQ8N187 725 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 AGR3Q8TD06 166 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 N4BP2L2Q92802 583 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-227ENST00000498056 PTCD3Q96EY7 689 aaKnown RBP13.03□□□□□ -0.32
CPNE1-227ENST00000498056 PRR11Q96HE9 360 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-227ENST00000498056 AIF1LQ9BQI0 150 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 PLCD4Q9BRC7 762 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 STRADBQ9C0K7 418 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 DRC3Q9H069 523 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 SPNS1Q9H2V7 528 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 PDE7BQ9NP56 450 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 MID1IP1Q9NPA3 183 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 CLCA2Q9UQC9 943 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 A0A0J9YVX5 310 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 OR2A25A4D2G3 310 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 TMEM114B3SHH9 223 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 PPP6CO00743 305 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 TOX3O15405 576 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-227ENST00000498056 CRCPO75575 148 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 LYPLA1O75608 230 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-227ENST00000498056 DKK1O94907 266 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 OR4F21O95013 312 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 MT-CO3P00414 261 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 CHRNGP07510 517 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 EBLN1P0CF75 366 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 C1GALT1C1LP0DN25 315 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 EZRP15311 586 aaKnown RBP13.02□□□□□ -0.33
CPNE1-227ENST00000498056 CD22P20273 847 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 HRH2P25021 359 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 CCKBRP32239 447 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 CSTF2P33240 577 aaKnown RBP eCLIP13.02□□□□□ -0.33
CPNE1-227ENST00000498056 CYP4F2P78329 520 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 CSNK1G2P78368 415 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 HSD11B2P80365 405 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.33
CPNE1-227ENST00000498056 DOC2AQ14183 400 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 C16orf72Q14CZ0 275 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 ZIC1Q15915 447 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 ISXQ2M1V0 245 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 PAGE2BQ5JRK9 111 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 TMTC4Q5T4D3 741 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 CDCP2Q5VXM1 449 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 GRHL2Q6ISB3 625 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 ZNF425Q6IV72 752 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 NXPE4Q6UWF7 544 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 SYVN1Q86TM6 617 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 PAQR7Q86WK9 346 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 KMT5CQ86Y97 462 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 TBC1D19Q8N5T2 526 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 OR4F6Q8NGB9 312 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 LRRC8CQ8TDW0 803 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 AGAP11Q8TF27 550 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 FCRL4Q96PJ5 515 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 ZNF382Q96SR6 550 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 ZFYVE21Q9BQ24 234 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 EFCAB11Q9BUY7 163 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 EHD1Q9H4M9 534 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 TMEM184CQ9NVA4 438 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 IRAK4Q9NWZ3 460 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 GEMIN8Q9NWZ8 242 aaKnown RBP13.02□□□□□ -0.33
CPNE1-227ENST00000498056 SNX7Q9UNH6 387 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 BTRCQ9Y297 605 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 FIS1Q9Y3D6 152 aa13.02□□□□□ -0.33
CPNE1-227ENST00000498056 A0A1B0GTL3 188 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 FFAR3O14843 346 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 GPR42O15529 346 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 HYAL3O43820 417 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-227ENST00000498056 PRAMEF4O60810 478 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 CTSVO60911 334 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 CLDN9O95484 217 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 STATHP02808 62 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 PCNAP12004 261 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 GRK2P25098 689 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 HMOX2P30519 316 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 SERPINB5P36952 375 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 PKNOX1P55347 436 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 ABCE1P61221 599 aaKnown RBP13.01□□□□□ -0.33
CPNE1-227ENST00000498056 BST1Q10588 318 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 STX3Q13277 289 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 TUBB3Q13509 450 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 DDX39BQ13838 428 aaKnown RBP13.01□□□□□ -0.33
CPNE1-227ENST00000498056 RBBP5Q15291 538 aaKnown RBP13.01□□□□□ -0.33
CPNE1-227ENST00000498056 GPR19Q15760 415 aa13.01□□□□□ -0.33
CPNE1-227ENST00000498056 CPSF6Q16630 551 aaKnown RBP eCLIP13.01□□□□□ -0.33
CPNE1-227ENST00000498056 ARL13AQ5H913 290 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-227ENST00000498056 PRAMEF9Q5VWM5 478 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms