RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SPARCL1Q14515 664 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 SYT16Q17RD7 645 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 CES4AQ5XG92 561 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 ITPRIPL1Q6GPH6 555 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 FBXO42Q6P3S6 717 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 CEP128Q6ZU80 1094 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.58■□□□□ 0.08
VIM-208ENST00000497849 ZC3H7AQ8IWR0 971 aaKnown RBP15.58■□□□□ 0.08
VIM-208ENST00000497849 EID3Q8N140 333 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 LILRB4Q8NHJ6 448 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 CFAP61Q8NHU2 1237 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 CABS1Q96KC9 395 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 ZNF354BQ96LW1 612 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 MIPEPQ99797 713 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 TBL1YQ9BQ87 522 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 LIME1Q9H400 295 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 MKKSQ9NPJ1 570 aaPredicted RBP15.58■□□□□ 0.08
VIM-208ENST00000497849 CDC14AQ9UNH5 594 aa15.58■□□□□ 0.08
VIM-208ENST00000497849 HRNRQ86YZ3 2850 aaPredicted RBP15.57■□□□□ 0.08
VIM-208ENST00000497849 HEATR5BQ9P2D3 2071 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 FAM90A27PA6NNH2 459 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 HOXD4P09016 255 aaPredicted RBP15.57■□□□□ 0.08
VIM-208ENST00000497849 OR56A5P0C7T3 313 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 C8orf89P0DMQ9 161 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 CD46P15529 392 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 EMP3P54852 163 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 LTBQ06643 244 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 CEBPEQ15744 281 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 PLAG1Q6DJT9 500 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 CRLF3Q8IUI8 442 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 TAB3Q8N5C8 712 aaPredicted RBP15.57■□□□□ 0.08
VIM-208ENST00000497849 TMEM178AQ8NBL3 297 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 OR2L3Q8NG85 312 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 OR2A1Q8NGT9 310 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 HDAC10Q969S8 669 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 MVB12AQ96EY5 273 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 MMABQ96EY8 250 aaPredicted RBP15.57■□□□□ 0.08
VIM-208ENST00000497849 UTP23Q9BRU9 249 aaKnown RBP15.57■□□□□ 0.08
VIM-208ENST00000497849 SLC39A10Q9ULF5 831 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 MKL2Q9ULH7 1088 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 RNF6Q9Y252 685 aa15.57■□□□□ 0.08
VIM-208ENST00000497849 RUVBL1Q9Y265 456 aaKnown RBP15.57■□□□□ 0.08
VIM-208ENST00000497849 FN1P02751 2386 aaKnown RBP15.56■□□□□ 0.08
VIM-208ENST00000497849 hCG_1818297A0A087WSY0 165 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 OR2A25A4D2G3 310 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 KRT87PA6NCN2 255 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 OR51F1A6NGY5 319 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 H0YGG7 62 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 PRPF4O43172 522 aaKnown RBP eCLIP15.56■□□□□ 0.08
VIM-208ENST00000497849 FOXS1O43638 330 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 OR1I1O60431 355 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 GPC4O75487 556 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 NEURL1O76050 574 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 RPN2P04844 631 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 ERVK-10P10266 1014 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 ARF3P61204 181 aaPredicted RBP15.56■□□□□ 0.08
VIM-208ENST00000497849 HSPA14Q0VDF9 509 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 HKDC1Q2TB90 917 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 BTBD16Q32M84 506 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 ANKRD20A2Q5SQ80 823 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 ANKRD20A1Q5TYW2 823 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 ANKRD20A3Q5VUR7 823 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 UNC5DQ6UXZ4 953 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 LANCL3Q6ZV70 420 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 SHISA5Q8N114 240 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 ARHGEF39Q8N4T4 335 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 LKAAEAR1Q8TD35 194 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 ASB5Q8WWX0 329 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 ZFYVE21Q9BQ24 234 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 FEZ2Q9UHY8 353 aaPredicted RBP15.56■□□□□ 0.08
VIM-208ENST00000497849 ZKSCAN5Q9Y2L8 839 aa15.56■□□□□ 0.08
VIM-208ENST00000497849 A0A1W2PPV9 198 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 PJA2O43164 708 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 ZWINTO95229 277 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 SP1P08047 785 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 TPH1P17752 444 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 COMTP21964 271 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 MSNP26038 577 aaKnown RBP15.55■□□□□ 0.08
VIM-208ENST00000497849 CHRNB4P30926 498 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 FOXN2P32314 431 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 PTGER1P34995 402 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 MAT1AQ00266 395 aaKnown RBP15.55■□□□□ 0.08
VIM-208ENST00000497849 MYBPHQ13203 477 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 PRPSAP1Q14558 356 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 MEP1AQ16819 746 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 CCSMST1Q4G0I0 132 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 SLC25A25Q6KCM7 469 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 CPEB2Q7Z5Q1 589 aaKnown RBP15.55■□□□□ 0.08
VIM-208ENST00000497849 RHOT2Q8IXI1 618 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 FAM57AQ8TBR7 257 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 MDFIQ99750 246 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 GOLPH3Q9H4A6 298 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 KCNK13Q9HB14 408 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 ZNF358Q9NW07 568 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 ST6GALNAC2Q9UJ37 374 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 PYCARDQ9ULZ3 195 aa15.55■□□□□ 0.08
VIM-208ENST00000497849 PHF3Q92576 2039 aaKnown RBP15.55■□□□□ 0.08
VIM-208ENST00000497849 A0A0A6YYC8 382 aaPredicted RBP15.54■□□□□ 0.08
VIM-208ENST00000497849 MACROD2A1Z1Q3 448 aa15.54■□□□□ 0.08
VIM-208ENST00000497849 H7C0C1 242 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms