RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 BTBD9Q96Q07 612 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 CITED2Q99967 270 aaPredicted RBP2.89□□□□□ -1.95
PSPC1-205ENST00000497722 NACAP1Q9BZK3 213 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 SDCBP2Q9H190 292 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 RIMS4Q9H426 269 aaPredicted RBP2.89□□□□□ -1.95
PSPC1-205ENST00000497722 FZD8Q9H461 694 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 SPHK2Q9NRA0 654 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 PDRG1Q9NUG6 133 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 PLCXD1Q9NUJ7 323 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 TMOD3Q9NYL9 352 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 CACNG5Q9UF02 275 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 EXOGQ9Y2C4 368 aaKnown RBP2.89□□□□□ -1.95
PSPC1-205ENST00000497722 PPP2R2CQ9Y2T4 447 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 SELENOKQ9Y6D0 94 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 COLEC10Q9Y6Z7 277 aa2.89□□□□□ -1.95
PSPC1-205ENST00000497722 COL2A1P02458 1487 aaPredicted RBP2.89□□□□□ -1.95
PSPC1-205ENST00000497722 SNURFLB1AK76 121 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 NR5A2O00482 541 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 PTGESO14684 152 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 ARHGEF9O43307 516 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 NADKO95544 446 aaPredicted RBP2.88□□□□□ -1.95
PSPC1-205ENST00000497722 GPIP06744 558 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 SPP1P10451 314 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 RPL35AP18077 110 aaKnown RBP2.88□□□□□ -1.95
PSPC1-205ENST00000497722 GP5P40197 560 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 PPARDQ03181 441 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 CACNG1Q06432 222 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 SULT2A1Q06520 285 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 RASGEF1BQ0VAM2 473 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 TFCP2Q12800 502 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 TRIM29Q14134 588 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 ZNF273Q14593 569 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 PTGISQ16647 500 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 UGCGQ16739 394 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 CTU2Q2VPK5 515 aaKnown RBP2.88□□□□□ -1.95
PSPC1-205ENST00000497722 XKR3Q5GH77 459 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 SHEQ5VZ18 495 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 UGT3A1Q6NUS8 523 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 CAVIN1Q6NZI2 390 aaKnown RBP2.88□□□□□ -1.95
PSPC1-205ENST00000497722 TTC27Q6P3X3 843 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 FUT10Q6P4F1 479 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 TRIM65Q6PJ69 517 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 FIP1L1Q6UN15 594 aaKnown RBP2.88□□□□□ -1.95
PSPC1-205ENST00000497722 STXBP4Q6ZWJ1 553 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 SLC24A5Q71RS6 500 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 NRARPQ7Z6K4 114 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 C4orf19Q8IY42 314 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 BMPERQ8N8U9 685 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 MAPK1IP1LQ8NDC0 245 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 OR5AP2Q8NGF4 316 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 OR10G8Q8NGN5 311 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 OLIG1Q8TAK6 271 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 BSCL2Q96G97 398 aaPredicted RBP2.88□□□□□ -1.95
PSPC1-205ENST00000497722 CCDC114Q96M63 670 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 USP28Q96RU2 1077 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 LPAR4Q99677 370 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 THUMPD3Q9BV44 507 aaKnown RBP2.88□□□□□ -1.95
PSPC1-205ENST00000497722 ST6GALNAC4Q9H4F1 302 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 ZWILCHQ9H900 591 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 GRPEL1Q9HAV7 217 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 DNAJC4Q9NNZ3 241 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 C2orf42Q9NWW7 574 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 GIMAP2Q9UG22 337 aa2.88□□□□□ -1.95
PSPC1-205ENST00000497722 RUVBL2Q9Y230 463 aaKnown RBP2.88□□□□□ -1.95
PSPC1-205ENST00000497722 IGLV7-46A0A075B6I9 117 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 IGKV3D-15A0A087WSY6 115 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 HTR3EA5X5Y0 456 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 CASTOR2A6NHX0 329 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ERI2A8K979 691 aaKnown RBP2.87□□□□□ -1.95
PSPC1-205ENST00000497722 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ZNF821O75541 412 aaPredicted RBP2.87□□□□□ -1.95
PSPC1-205ENST00000497722 SEC24AO95486 1093 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 GBAP04062 536 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ATP1B1P05026 303 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 SERPING1P05155 500 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 SCG2P13521 617 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ZNF26P17031 533 aaPredicted RBP2.87□□□□□ -1.95
PSPC1-205ENST00000497722 CEBPBP17676 345 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 TYMPP19971 482 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 CD27P26842 260 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ALDH1B1P30837 517 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 SSTR1P30872 391 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 MMP12P39900 470 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 RGS7P49802 495 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 GSDMDP57764 484 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ZNF74Q16587 644 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 C6orf136Q5SQH8 315 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 SPOUT1Q5T280 376 aaKnown RBP2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ADAMTSL4-AS1Q5T5F5 129 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 FAM91A1Q658Y4 838 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ZNF772Q68DY9 489 aaPredicted RBP2.87□□□□□ -1.95
PSPC1-205ENST00000497722 CASC4Q6P4E1 433 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 NOTUMQ6P988 496 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 CYB5D1Q6P9G0 228 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 IL27RAQ6UWB1 636 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 FCRLAQ7L513 359 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 GALNTL5Q7Z4T8 443 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 PIGWQ7Z7B1 504 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 TIGD4Q8IY51 512 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 TCEANCQ8N8B7 351 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms