RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PKP2Q99959 881 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 PCGF1Q9BSM1 259 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 THUMPD2Q9BTF0 503 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM245Q9H330 911 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 HINT3Q9NQE9 182 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 AKAP7Q9P0M2 348 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TRPC4Q9UBN4 977 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 IPO11Q9UI26 975 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 DBNLQ9UJU6 430 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TSPAN16Q9UKR8 245 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 AGO2Q9UKV8 859 aaKnown RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 GPR132Q9UNW8 380 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 CHKBQ9Y259 395 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 PLEKHA6Q9Y2H5 1048 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 TRIP12Q14669 1992 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 DOCK2Q92608 1830 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 SDK2Q58EX2 2172 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 MROH7-TTC4A0A0A0MT08 1334 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 ASTN1O14525 1302 aa2.37□□□□□ -2.03
CKS1BP2-201ENST00000497342 MUC22E2RYF6 1773 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 KIF20BQ96Q89 1820 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CYP2D7A0A087X1C5 515 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 A0A0B4J203 849 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 A0A0G2JK05 382 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 C13orf42A0A1B0GVH6 325 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 A0A1W2PP11 408 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 C1orf226A1L170 272 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 VPS37CA5D8V6 355 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 FAM149AA5PLN7 773 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 GOLGA6L9A6NEM1 432 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 F8WDY8 70 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 VCYO14598 125 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 TO15178 435 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 KCNN4O15554 427 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 RRP8O43159 456 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 SMPD2O60906 423 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF217O75362 1048 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CLDN7O95471 211 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CXCL14O95715 111 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 BCL10O95999 233 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 C9P02748 559 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 PGK2P07205 417 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 FAM86B2P0C5J1 330 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 OR2T7P0C7T2 308 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 HKR1P10072 659 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 ITGAMP11215 1152 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 GJA1P17302 382 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CYP11B2P19099 503 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 KELP23276 732 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 ACAT1P24752 427 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CDKN1AP38936 164 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 PEX19P40855 299 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 MDH1P40925 334 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 RPL21P46778 160 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 RABIFP47224 123 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 KCNJ4P48050 445 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 ARCN1P48444 511 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 LHX1P48742 406 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 RASSF2P50749 326 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 UCP2P55851 309 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 POLR2LP62875 67 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 DLK1P80370 383 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 MZT1Q08AG7 82 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 KLHL30Q0D2K2 578 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 ICAM4Q14773 271 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF169Q14929 603 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 PRKD1Q15139 912 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 KIF19Q2TAC6 998 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 TIGD2Q4W5G0 525 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 NSUN5P2Q63ZY6 315 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 KDELC1Q6UW63 502 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 RBM43Q6ZSC3 357 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CYB5R4Q7L1T6 521 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC29A4Q7RTT9 530 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 TRAPPC11Q7Z392 1133 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 SYVN1Q86TM6 617 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 TLK2Q86UE8 772 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 HAPLN4Q86UW8 402 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 LONP2Q86WA8 852 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 C1QL4Q86Z23 238 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 DDIASQ8IXT1 998 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CCDC13Q8IYE1 715 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 KDM8Q8N371 416 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPATA6LQ8N4H0 392 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 PARP16Q8N5Y8 322 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 FAM133AQ8N9E0 248 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 BOLLQ8N9W6 283 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 UXS1Q8NBZ7 420 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 THAP6Q8TBB0 222 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CAGE1Q8TC20 777 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 TFAP2BQ92481 460 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 N4BP2L2Q92802 583 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLCO4A1Q96BD0 722 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 MSI2Q96DH6 328 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 RITA1Q96K30 269 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPATA33Q96N06 139 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 TXN2Q99757 166 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 OLFM1Q99784 485 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CPNE1Q99829 537 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLX1AQ9BQ83 275 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms