RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	C1GALT1	Q9NS00	363 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TMEM184C	Q9NVA4	438 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TOR4A	Q9NXH8	423 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SEMA5B	Q9P283	1151 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	MARCO	Q9UEW3	520 aa	Predicted RBP	13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SPTB	P11277	2137 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852		H7BY64	318 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	KIF1C	O43896	1103 aa	Known RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	EDF1	O60869	148 aa	Known RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	RFPL3	O75679	317 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	OR4F21	O95013	312 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SNUPN	O95149	360 aa	Known RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CLDN9	O95484	217 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ESRRB	O95718	433 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PVR	P15151	417 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CSRP1	P21291	193 aa	Known RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CDH3	P22223	829 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	HRH2	P25021	359 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	VARS	P26640	1264 aa	Known RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CSNK1G2	P78368	415 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TRIP6	Q15654	476 aa	Known RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	GGTA1P	Q4G0N0	100 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	LIPJ	Q5W064	366 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	FCRL6	Q6DN72	434 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	LETMD1	Q6P1Q0	360 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	GPRIN3	Q6ZVF9	776 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	MILR1	Q7Z6M3	343 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CUZD1	Q86UP6	607 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PAQR7	Q86WK9	346 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CARF	Q8N187	725 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	DCBLD1	Q8N8Z6	715 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ZUFSP	Q96AP4	578 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	GRAMD1A	Q96CP6	724 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PTCD3	Q96EY7	689 aa	Known RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PRAP1	Q96NZ9	151 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TRAPPC9	Q96Q05	1148 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	GFM1	Q96RP9	751 aa	Known RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	DPYSL5	Q9BPU6	564 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SPNS1	Q9H2V7	528 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SEMA6C	Q9H3T2	930 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ACTR8	Q9H981	624 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	EML4	Q9HC35	981 aa	Known RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PDP2	Q9P2J9	529 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ANKMY1	Q9P2S6	941 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TRPS1	Q9UHF7	1281 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	HAO1	Q9UJM8	370 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	KLHL20	Q9Y2M5	609 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	RNF11	Q9Y3C5	154 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	FIS1	Q9Y3D6	152 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PCDHGA1	Q9Y5H4	931 aa		13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PTPRZ1	P23471	2315 aa	Predicted RBP	13.41	□□□□□ -0.26
ATPAF2-208	ENST00000496852	KCNE1B	A0A087WTH5	132 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	OR2A25	A4D2G3	310 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852		D6RAR5	112 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	GIPC1	O14908	333 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	NRP2	O60462	931 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ST6GAL1	P15907	406 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CCR8	P51685	355 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	NAA25	Q14CX7	972 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	GRHL2	Q6ISB3	625 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	FIGLA	Q6QHK4	219 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	OR4D9	Q8NGE8	314 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	WDR48	Q8TAF3	677 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	BCAS4	Q8TDM0	211 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	C7orf26	Q96N11	449 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CCT8L2	Q96SF2	557 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ELAC2	Q9BQ52	826 aa	Known RBP	13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PLCD4	Q9BRC7	762 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	EFCAB11	Q9BUY7	163 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ZMYND15	Q9H091	742 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SYNDIG1	Q9H7V2	258 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PRM3	Q9NNZ6	103 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	KLHL3	Q9UH77	587 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SNX7	Q9UNH6	387 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	RAP2C	Q9Y3L5	183 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	IGHV5-51	A0A0C4DH38	117 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SLC30A4	O14863	429 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TOX3	O15405	576 aa	Predicted RBP	13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CRCP	O75575	148 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	FGF4	P08620	206 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	JUP	P14923	745 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	DRD4	P21917	467 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	MPST	P25325	297 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	HNF4A	P41235	474 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	FOXA1	P55317	472 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	REEP5	Q00765	189 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	MEF2A	Q02078	507 aa	Predicted RBP	13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	LAPTM5	Q13571	262 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SPIDR	Q14159	915 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ZIC1	Q15915	447 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	FAM219B	Q5XKK7	198 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PRSS42	Q7Z5A4	293 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ZNF781	Q8N8C0	355 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PRR11	Q96HE9	360 aa	Predicted RBP	13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SARG	Q9BW04	601 aa		13.4	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms