RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 FFAR3O14843 346 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 GPR42O15529 346 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 KLF7O75840 302 aaPredicted RBP16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 HIST1H2AGP0C0S8 130 aaPredicted RBP16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 CDH1P12830 882 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 NR1D1P20393 614 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 HIST1H2ADP20671 130 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 STX2P32856 288 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 SLC12A2P55011 1212 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 MEF2AQ02078 507 aaPredicted RBP16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 NFATC3Q12968 1075 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 BMPR2Q13873 1038 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 SLMAPQ14BN4 828 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 TCTE1Q5JU00 501 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 NKAPQ8N5F7 415 aaKnown RBP16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 CSNK1A1LQ8N752 337 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 PDLIM5Q96HC4 596 aaKnown RBP16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 HIST1H2AHQ96KK5 128 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 OR2A5Q96R48 311 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 OR4K3Q96R72 315 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 HIST1H2AJQ99878 128 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 MACROD1Q9BQ69 325 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 H2AFJQ9BTM1 129 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 SGPP1Q9BX95 441 aa16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 CDC42EP4Q9H3Q1 356 aaKnown RBP16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 GPN3Q9UHW5 284 aaPredicted RBP16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 RUVBL1Q9Y265 456 aaKnown RBP16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 MRPS2Q9Y399 296 aaKnown RBP16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 PTRH2Q9Y3E5 179 aaKnown RBP16.77■□□□□ 0.28
RHBDD3-207ENST00000496342 SMG1Q96Q15 3661 aaKnown RBP16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 K7EM74 188 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 SRPX2O60687 465 aaPredicted RBP16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 TUBB4AP04350 444 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 OTX2P32243 289 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 ARSFP54793 590 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 CSNK1G2P78368 415 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 ABATP80404 500 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 POU4F1Q01851 419 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 KCNAB2Q13303 367 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 PRTGQ2VWP7 1150 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 FBXO48Q5FWF7 155 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 COLEC12Q5KU26 742 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 MRPL14Q6P1L8 145 aaKnown RBP16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 LCTLQ6UWM7 567 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 SHISA6Q6ZSJ9 500 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 CYS1Q717R9 158 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 OR56A3Q8NH54 315 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 APOBEC4Q8WW27 367 aaKnown RBP16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 FBXL8Q96CD0 374 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 DPH2Q9BQC3 489 aaPredicted RBP16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 SPNS1Q9H2V7 528 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 CTNNAL1Q9UBT7 734 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 CTSFQ9UBX1 484 aa16.76■□□□□ 0.27
RHBDD3-207ENST00000496342 PABPN1LA6NDY0 278 aaKnown RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 NCF1BA6NI72 391 aaPredicted RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 NCF1CA8MVU1 366 aaPredicted RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 ACSL3O95573 720 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 ENO2P09104 434 aaPredicted RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 CCDC166P0CW27 439 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 NCF1P14598 390 aaPredicted RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 EZRP15311 586 aaKnown RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 NPPBP16860 134 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 BCL6P41182 706 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 AP1S2P56377 157 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 ATP1A4Q13733 1029 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 CSHL1Q14406 222 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 NAA25Q14CX7 972 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 ZKSCAN8Q15776 578 aaPredicted RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 UAP1Q16222 522 aaPredicted RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 CAPN13Q6MZZ7 669 aaPredicted RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 VN1R4Q7Z5H5 301 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 C17orf64Q86WR6 236 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 SHISA5Q8N114 240 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 UHMK1Q8TAS1 419 aaKnown RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 PTERQ96BW5 349 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 CABS1Q96KC9 395 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 TSNARE1Q96NA8 513 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 EGFL8Q99944 293 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 TRIM54Q9BYV2 358 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 POPDC3Q9HBV1 291 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 ZNF71Q9NQZ8 489 aaPredicted RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 GEMIN8Q9NWZ8 242 aaKnown RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 MTRF1LQ9UGC7 380 aaKnown RBP16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 DOCK10Q96BY6 2186 aa16.75■□□□□ 0.27
RHBDD3-207ENST00000496342 LCMT2O60294 686 aaKnown RBP16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 UMODP07911 640 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 RHOXF2BP0C7M4 288 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 CD1DP15813 335 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 STMN1P16949 149 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 SPRP35270 261 aaPredicted RBP16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 FOLR3P41439 243 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 DLG1Q12959 904 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 OR4D1Q15615 310 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 CATSPEREQ5SY80 951 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 GRTP1Q5TC63 336 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 FRA10AC1Q70Z53 315 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 PRSS58Q8IYP2 241 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 CEP112Q8N8E3 955 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 EXT2Q93063 718 aa16.74■□□□□ 0.27
RHBDD3-207ENST00000496342 TSPAN17Q96FV3 270 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms