RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 MINDY3Q9H8M7 445 aa3.6□□□□□ -1.83
CLTC-208ENST00000496076 TRPV4Q9HBA0 871 aa3.6□□□□□ -1.83
CLTC-208ENST00000496076 ABCB8Q9NUT2 735 aa3.6□□□□□ -1.83
CLTC-208ENST00000496076 MIOSQ9NXC5 875 aa3.6□□□□□ -1.83
CLTC-208ENST00000496076 ISY1Q9ULR0 285 aaKnown RBP3.6□□□□□ -1.83
CLTC-208ENST00000496076 ABCC9O60706 1549 aa3.6□□□□□ -1.83
CLTC-208ENST00000496076 IGHV4-4A0A075B6R2 117 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 A0A1W2PRV1 198 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 BICDL2A1A5D9 508 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 SMIM30A4D0T7 59 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 LRRD1A4D1F6 860 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 TMEM221A6NGB7 291 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 PTGESO14684 152 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 KERAO60938 352 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 RLN1P04808 185 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 FRMD6-AS1P0C7T7 363 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 TRIM49P0CI25 452 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 TRIM49CP0CI26 452 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 THEGLP0DJG4 465 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 SMIM18P0DKX4 95 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 ACAT1P24752 427 aaKnown RBP3.59□□□□□ -1.83
CLTC-208ENST00000496076 SLC9A3P48764 834 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 LIMK1P53667 647 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 NME5P56597 212 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 ACTN3Q08043 901 aaPredicted RBP3.59□□□□□ -1.83
CLTC-208ENST00000496076 GAGE2BQ13066 116 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 GAGE2EQ4V326 116 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 LBHQ53QV2 105 aaPredicted RBP3.59□□□□□ -1.83
CLTC-208ENST00000496076 GAGE2AQ6NT46 116 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 MFSD12Q6NUT3 480 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 LINC00696Q6ZRV3 163 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 Q6ZSR9 355 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 ISCA2Q86U28 154 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 LRRTM1Q86UE6 522 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 OCC1Q8TAD7 63 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 ATL1Q8WXF7 558 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 DAZLQ92904 295 aaKnown RBP3.59□□□□□ -1.83
CLTC-208ENST00000496076 ERO1AQ96HE7 468 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 MLPHQ9BV36 600 aaPredicted RBP3.59□□□□□ -1.83
CLTC-208ENST00000496076 SLC5A7Q9GZV3 580 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 FN3KQ9H479 309 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 ERAP1Q9NZ08 941 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 GAGE2DQ9UEU5 116 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 ITGA11Q9UKX5 1188 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 LIPT1Q9Y234 373 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 MOB4Q9Y3A3 225 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 KNSTRNQ9Y448 316 aa3.59□□□□□ -1.83
CLTC-208ENST00000496076 SPIN1Q9Y657 262 aaPredicted RBP3.59□□□□□ -1.83
CLTC-208ENST00000496076 TDRD15B5MCY1 1934 aaKnown RBP3.59□□□□□ -1.83
CLTC-208ENST00000496076 PRRC2AP48634 2157 aaKnown RBP3.59□□□□□ -1.84
CLTC-208ENST00000496076 A0A087WV48 116 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 A0A1W2PPQ1 181 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 HYKKA2RU49 373 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 RTCAO00442 366 aaKnown RBP3.58□□□□□ -1.84
CLTC-208ENST00000496076 OR10H2O60403 315 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 KINO60870 393 aaKnown RBP3.58□□□□□ -1.84
CLTC-208ENST00000496076 AP2A2O94973 939 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 SIX3O95343 332 aaPredicted RBP3.58□□□□□ -1.84
CLTC-208ENST00000496076 GCNT3O95395 438 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 STMN1P16949 149 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 EPHA2P29317 976 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 ASCL1P50553 236 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 ALDH3A2P51648 485 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 NAGLUP54802 743 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 GLIPR1L2Q4G1C9 344 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 LRRC73Q5JTD7 316 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 PAQR6Q6TCH4 344 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 TMEM270Q6UE05 265 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 ARHGAP22Q7Z5H3 698 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 COMMD2Q86X83 199 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 TIGD4Q8IY51 512 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 CFAP206Q8IYR0 622 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 MAML2Q8IZL2 1156 aaPredicted RBP3.58□□□□□ -1.84
CLTC-208ENST00000496076 PAPD5Q8NDF8 572 aaKnown RBP3.58□□□□□ -1.84
CLTC-208ENST00000496076 DNASE1L2Q92874 299 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 MOB3AQ96BX8 217 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 OMA1Q96E52 524 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 AK8Q96MA6 479 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 LRRC3BQ96PB8 259 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 HNRNPABQ99729 332 aaKnown RBP3.58□□□□□ -1.84
CLTC-208ENST00000496076 LMF2Q9BU23 707 aaKnown RBP3.58□□□□□ -1.84
CLTC-208ENST00000496076 CACNG6Q9BXT2 260 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 RAB9BQ9NP90 201 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 CNIH4Q9P003 139 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 AKAP7Q9P0M2 348 aaPredicted RBP3.58□□□□□ -1.84
CLTC-208ENST00000496076 CDH7Q9ULB5 785 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 MTUS1Q9ULD2 1270 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 ABT1Q9ULW3 272 aaKnown RBP3.58□□□□□ -1.84
CLTC-208ENST00000496076 GRIP1Q9Y3R0 1128 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 YIPF1Q9Y548 306 aa3.58□□□□□ -1.84
CLTC-208ENST00000496076 ELOVL7A1L3X0 281 aa3.57□□□□□ -1.84
CLTC-208ENST00000496076 OOEPA6NGQ2 149 aa3.57□□□□□ -1.84
CLTC-208ENST00000496076 DDX39AO00148 427 aaKnown RBP3.57□□□□□ -1.84
CLTC-208ENST00000496076 SLC33A1O00400 549 aaPredicted RBP3.57□□□□□ -1.84
CLTC-208ENST00000496076 IFIT3O14879 490 aaKnown RBP3.57□□□□□ -1.84
CLTC-208ENST00000496076 SELENOFO60613 162 aa3.57□□□□□ -1.84
CLTC-208ENST00000496076 DUS4LO95620 317 aaKnown RBP3.57□□□□□ -1.84
CLTC-208ENST00000496076 ACP2P11117 423 aa3.57□□□□□ -1.84
CLTC-208ENST00000496076 P4HA1P13674 534 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms