RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 DOC2AQ14183 400 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 E2F2Q14209 437 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 FCRL6Q6DN72 434 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 FIGLAQ6QHK4 219 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 ADCK2Q7Z695 626 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 FAM129CQ86XR2 697 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 SLITRK4Q8IW52 837 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 LRRC8CQ8TDW0 803 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 AGAP11Q8TF27 550 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 PTCD3Q96EY7 689 aaKnown RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 MAGEB18Q96M61 343 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 CDK15Q96Q40 435 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 PLCD4Q9BRC7 762 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 ZNF395Q9H8N7 513 aaPredicted RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 ANKMY1Q9P2S6 941 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 ZNF225Q9UK10 706 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 OR2A25A4D2G3 310 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 ITM2AO43736 263 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 NRP2O60462 931 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 UGDHO60701 494 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 ESRRBO95718 433 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 FTH1P19P0C7X4 201 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 EBLN1P0CF75 366 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 CD22P20273 847 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 MDH1P40925 334 aaKnown RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 SLC1A6P48664 564 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 NOVA1P51513 510 aaKnown RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 PKNOX1P55347 436 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 ERVPABLB-1P60509 514 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 SH3BP2P78314 561 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 INSM1Q01101 510 aaPredicted RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 GALNT1Q10472 559 aaPredicted RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 ZIC1Q15915 447 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 RSPO4Q2I0M5 234 aaPredicted RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 LIPJQ5W064 366 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 LETMD1Q6P1Q0 360 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 ATG14Q6ZNE5 492 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 RBM44Q6ZP01 1051 aaKnown RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 GPRIN3Q6ZVF9 776 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 MILR1Q7Z6M3 343 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 SYVN1Q86TM6 617 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 PAQR7Q86WK9 346 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 C19orf47Q8N9M1 422 aaKnown RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 L3MBTL4Q8NA19 623 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 OR4F6Q8NGB9 312 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 EFCAB11Q9BUY7 163 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 SHCBP1LQ9BZQ2 653 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 C20orf27Q9GZN8 174 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 EML4Q9HC35 981 aaKnown RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 MID1IP1Q9NPA3 183 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 GEMIN8Q9NWZ8 242 aaKnown RBP18.71■□□□□ 0.59
ATG3-208ENST00000495756 RNF11Q9Y3C5 154 aa18.71■□□□□ 0.59
ATG3-208ENST00000495756 COL27A1Q8IZC6 1860 aaPredicted RBP18.7■□□□□ 0.58
ATG3-208ENST00000495756 A8MU76 341 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 GIPC1O14908 333 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 PRAMEF10O60809 474 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 SNNO75324 88 aaPredicted RBP18.7■□□□□ 0.58
ATG3-208ENST00000495756 LYPLA1O75608 230 aaPredicted RBP18.7■□□□□ 0.58
ATG3-208ENST00000495756 ZBTB11O95625 1053 aaPredicted RBP18.7■□□□□ 0.58
ATG3-208ENST00000495756 HSPA4LO95757 839 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 ANKRD34CP0C6C1 535 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 MEF2AQ02078 507 aaPredicted RBP18.7■□□□□ 0.58
ATG3-208ENST00000495756 ZFP36L1Q07352 338 aaKnown RBP18.7■□□□□ 0.58
ATG3-208ENST00000495756 SLBPQ14493 270 aaKnown RBP eCLIP18.7■□□□□ 0.58
ATG3-208ENST00000495756 DHRS13Q6UX07 377 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 ARHGAP22Q7Z5H3 698 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 CUZD1Q86UP6 607 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 MYLK4Q86YV6 388 aaPredicted RBP18.7■□□□□ 0.58
ATG3-208ENST00000495756 KLHL6Q8WZ60 621 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 GRAMD1AQ96CP6 724 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 CCDC74BQ96LY2 380 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 AIF1LQ9BQI0 150 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 SPNS1Q9H2V7 528 aa18.7■□□□□ 0.58
ATG3-208ENST00000495756 APOBEC2Q9Y235 224 aaKnown RBP18.7■□□□□ 0.58
ATG3-208ENST00000495756 OR4F21O95013 312 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 SNUPNO95149 360 aaKnown RBP18.69■□□□□ 0.58
ATG3-208ENST00000495756 SDHBP21912 280 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 HNF4AP41235 474 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 SEPHS1P49903 392 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 PDX1P52945 283 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 GYS2P54840 703 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 REEP5Q00765 189 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 RELAQ04206 551 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 LAPTM5Q13571 262 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 GGTA1PQ4G0N0 100 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 PAGE2BQ5JRK9 111 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 PHF19Q5T6S3 580 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 CDCP2Q5VXM1 449 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 GRHL2Q6ISB3 625 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 RGS9BPQ6ZS82 235 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 B3GNT8Q7Z7M8 397 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 KMT5CQ86Y97 462 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 ZNF740Q8NDX6 193 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 TCTN2Q96GX1 697 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 MAGEB10Q96LZ2 347 aaPredicted RBP18.69■□□□□ 0.58
ATG3-208ENST00000495756 SORT1Q99523 831 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 CHRNA10Q9GZZ6 450 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 ZNF768Q9H5H4 540 aaKnown RBP18.69■□□□□ 0.58
ATG3-208ENST00000495756 THAP1Q9NVV9 213 aa18.69■□□□□ 0.58
ATG3-208ENST00000495756 KCNE1BA0A087WTH5 132 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms