RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 SPINT3P49223 89 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 MAN2A2P49641 1150 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 SUOXP51687 545 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 PTTG1IPP53801 180 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 RPS16P62249 146 aaKnown RBP5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 MPP1Q00013 466 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 ZNF844Q08AG5 666 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 CTBP1Q13363 440 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 FRG1Q14331 258 aaKnown RBP5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 SEMA3AQ14563 771 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 ACOX1Q15067 660 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 KLHL38Q2WGJ6 581 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 HSP90AA5PQ58FG0 334 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 FAM209BQ5JX69 171 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 TEDDM1Q5T9Z0 273 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 AGAP9Q5VTM2 703 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 SEL1L3Q68CR1 1132 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 PDPK2PQ6A1A2 396 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 ZNF470Q6ECI4 717 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 AFTPHQ6ULP2 937 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 FAM151BQ6UXP7 276 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 Q6ZRM9 215 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 CYS1Q717R9 158 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 TECPR1Q7Z6L1 1165 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 LDB1Q86U70 411 aaPredicted RBP5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 KBTBD6Q86V97 674 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 DENND6AQ8IWF6 608 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 CNTN4Q8IWV2 1026 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 CTAGE3PQ8IX95 158 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 IQCKQ8N0W5 287 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 FRMD1Q8N878 549 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 CXorf40AQ8TE69 158 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 NTN5Q8WTR8 489 aaPredicted RBP5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 RLN3Q8WXF3 142 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 DTD2Q96FN9 168 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 COQ10AQ96MF6 247 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 PAFAH2Q99487 392 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 WDR12Q9GZL7 423 aaKnown RBP5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 FAM96AQ9H5X1 160 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 IL26Q9NPH9 171 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 SLAMF7Q9NQ25 335 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 ITM2CQ9NQX7 267 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 IARS2Q9NSE4 1012 aaKnown RBP5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 CTNNAL1Q9UBT7 734 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 FZD4Q9ULV1 537 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 NCKAP1Q9Y2A7 1128 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 PSAT1Q9Y617 370 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 NUMA1Q14980 2115 aa5.41□□□□□ -1.54
GAPVD1-218ENST00000495588 DOCK9Q9BZ29 2069 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 TBC1D3DA0A087WVF3 549 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 TBC1D3IA0A087WXS9 549 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 TBC1D3EA0A087X179 549 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 TBC1D3KA0A087X1G2 549 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 GLYATL1P3A0A0U1RQE8 302 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 TBC1D3FA6NER0 549 aaPredicted RBP5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 IGLON5A6NGN9 336 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 TBC1D3LB9A6J9 549 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 DIRC3C9JPN6 131 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 AGPSO00116 658 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 RASGRF2O14827 1237 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 CD3EAPO15446 510 aaKnown RBP5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 TM7SF2O76062 418 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 SRP72O76094 671 aaKnown RBP5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 UNC5CO95185 931 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 APBB3O95704 486 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 IGLV3-19P01714 112 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 TBC1D3HP0C7X1 549 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 UGT1A6P19224 532 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 UGT1A1P22309 533 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 UGT1A4P22310 534 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 GABRB3P28472 473 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 MAT2AP31153 395 aaKnown RBP5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 UGT1A3P35503 534 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 UGT1A5P35504 534 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 MAGEA9P43362 315 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 ABCG1P45844 678 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 CXCL12P48061 93 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 CCR3P51677 355 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 CHN2P52757 468 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 WNT3P56703 355 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 DCDC1P59894 354 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 MXRA7P84157 204 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 CREB5Q02930 508 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 CACNG1Q06432 222 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 DMWDQ09019 674 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 IFFO1Q0D2I5 559 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 CCDC15Q0P6D6 951 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 RAB32Q13637 225 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 THOC5Q13769 683 aaKnown RBP5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 CHRNA6Q15825 494 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 GRAMD1BQ3KR37 738 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 ATP13A5Q4VNC0 1218 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 FASTKD1Q53R41 847 aaKnown RBP5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 ZRANB3Q5FWF4 1079 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 ZNF789Q5FWF6 425 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 C3orf38Q5JPI3 329 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 CEP85LQ5SZL2 805 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 HENMT1Q5T8I9 393 aaKnown RBP5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 TBC1D3GQ6DHY5 549 aa5.4□□□□□ -1.54
GAPVD1-218ENST00000495588 TBC1D3CQ6IPX1 549 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms