RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 C1orf216Q8TAB5 229 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 ZNF480Q8WV37 535 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 SMPDL3AQ92484 453 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 PIGKQ92643 395 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 KLK6Q92876 244 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 SH3KBP1Q96B97 665 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 WDR92Q96MX6 357 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 ANKRD27Q96NW4 1050 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 NPAS2Q99743 824 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 SH3GL1Q99961 368 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 SGPP1Q9BX95 441 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 LGR4Q9BXB1 951 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 TRIM15Q9C019 465 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 VCX3BQ9H321 246 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 MUC13Q9H3R2 512 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 OSGEPL1Q9H4B0 414 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 RMND5AQ9H871 391 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 ERVMER34-1Q9H9K5 563 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 INTS7Q9NVH2 962 aaKnown RBP9.92□□□□□ -0.82
HDAC3-214ENST00000495485 FAM86C1Q9NVL1 165 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 AHSPQ9NZD4 102 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 VPS29Q9UBQ0 182 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 SLC7A8Q9UHI5 535 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 RUVBL1Q9Y265 456 aaKnown RBP9.92□□□□□ -0.82
HDAC3-214ENST00000495485 L3MBTL1Q9Y468 752 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 GPSM3Q9Y4H4 160 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 OR1A2Q9Y585 309 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 BPTFQ12830 3046 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 A0A1B0GTL3 188 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 FOXE1O00358 373 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 PRMT3O60678 531 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 EEDO75530 441 aaKnown RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 CCNDBP1O95273 360 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 PSMG1O95456 288 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 CER1O95813 267 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 CEACAM5P06731 702 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 MAT2AP31153 395 aaKnown RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 IGFALSP35858 605 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 ASMTP46597 345 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 RABIFP47224 123 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 CLCNKAP51800 687 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 LIMK1P53667 647 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 LRRC74AQ0VAA2 488 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 TSTA3Q13630 321 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 NFYCQ13952 458 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 DOC2AQ14183 400 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 RCAN2Q14206 197 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 FGL2Q14314 439 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 NFATC4Q14934 902 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 PYCR3Q53H96 274 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 SPIN4Q56A73 249 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 PRAMEF14Q5SWL7 426 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 PRAMEF13Q5VWM6 474 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 CAPRIN2Q6IMN6 1127 aaKnown RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 RIPOR1Q6ZS17 1223 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 C17orf64Q86WR6 236 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 ENDOVQ8N8Q3 282 aaKnown RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 TMEM145Q8NBT3 493 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 OR2T11Q8NH01 316 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 SNX19Q92543 992 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 POP5Q969H6 163 aaKnown RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 MTFMTQ96DP5 389 aaKnown RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 SCARF2Q96GP6 870 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 C12orf66Q96MD2 445 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 OR2M4Q96R27 311 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 FERD3LQ96RJ6 166 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 PRPF18Q99633 342 aaKnown RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 C1orf50Q9BV19 199 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 ARRDC1-AS1Q9H2J1 176 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 PELI2Q9HAT8 420 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 CAPN10Q9HC96 672 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 CD93Q9NPY3 652 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 SEMA4GQ9NTN9 838 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 INVSQ9Y283 1065 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 TDRKHQ9Y2W6 561 aaKnown RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 TSC22D4Q9Y3Q8 395 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 POLR3HQ9Y535 204 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 PTGDR2Q9Y5Y4 395 aa9.91□□□□□ -0.82
HDAC3-214ENST00000495485 TDRD6O60522 2096 aaKnown RBP9.91□□□□□ -0.82
HDAC3-214ENST00000495485 PCM1Q15154 2024 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 PCDH15Q96QU1 1955 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 KCNE1BA0A087WTH5 132 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 PRSS38A1L453 326 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 PDZK1P1A8MUH7 402 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 A8MUI8 341 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 E7ENX8 843 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 E7EQ34 232 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 GMNNO75496 209 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 KCNH1O95259 989 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 G6PDP11413 515 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 PCNAP12004 261 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 ACP5P13686 325 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 NPPBP16860 134 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 HRH2P25021 359 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 RPL3P39023 403 aaKnown RBP9.9□□□□□ -0.82
HDAC3-214ENST00000495485 PIK3CBP42338 1070 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 HTR6P50406 440 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 ATXN3P54252 364 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-214ENST00000495485 DIO3P55073 304 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 C21orf59P57076 290 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms