RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 B4GALNT2Q8NHY0 566 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 SNX19Q92543 992 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 EZH1Q92800 747 aaPredicted RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 SH3KBP1Q96B97 665 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 PAWRQ96IZ0 340 aaKnown RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 MAGEB10Q96LZ2 347 aaPredicted RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 TUBA1CQ9BQE3 449 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 CCM2Q9BSQ5 444 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 LHPPQ9H008 270 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 TMEFF2Q9UIK5 374 aaPredicted RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 RUVBL1Q9Y265 456 aaKnown RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 MYO7AQ13402 2215 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 SERTM1A2A2V5 107 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 NPIPB8E9PQR5 432 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 EFCAB14O75071 495 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 CPNE6O95741 557 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 ELFN1P0C7U0 828 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 CD247P20963 164 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 KDELR2P33947 212 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 SIM2Q14190 667 aaPredicted RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 VMACQ2NL98 169 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 HKDC1Q2TB90 917 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 LDLRAP1Q5SW96 308 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 CPZQ66K79 652 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 XAF1Q6GPH4 301 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 TECPR1Q7Z6L1 1165 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 VTCN1Q7Z7D3 282 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 C1orf52Q8N6N3 182 aaKnown RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 MRPL43Q8N983 215 aaKnown RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 ATL1Q8WXF7 558 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 HHIPQ96QV1 700 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 CCDC90BQ9GZT6 254 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 SPATA6Q9NWH7 488 aaPredicted RBP10.84□□□□□ -0.67
CHMP3-209ENST00000494623 TBC1D14Q9P2M4 693 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 COQ6Q9Y2Z9 468 aa10.84□□□□□ -0.67
CHMP3-209ENST00000494623 ANKRD33BA6NCL7 494 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 GABRR3A8MPY1 467 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 KPNA3O00505 521 aaPredicted RBP10.83□□□□□ -0.68
CHMP3-209ENST00000494623 UGDHO60701 494 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 ANXA4P09525 319 aaPredicted RBP10.83□□□□□ -0.68
CHMP3-209ENST00000494623 CYP4B1P13584 511 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 IL1RNP18510 177 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 IMPA1P29218 277 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 ARHGDIAP52565 204 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 RAD23AP54725 363 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 ISL1P61371 349 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 IL5RAQ01344 420 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 ZNF77Q15935 545 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 LAIR2Q6ISS4 152 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 LIPIQ6XZB0 460 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 MSANTD1Q6ZTZ1 278 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 CEP68Q76N32 757 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 TRIM74Q86UV6 250 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 ZBTB46Q86UZ6 589 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 CYP4Z1Q86W10 505 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 ZZZ3Q8IYH5 903 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 CFAP206Q8IYR0 622 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 CHPFQ8IZ52 775 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 NRBF2Q96F24 287 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 FCRL1Q96LA6 429 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 DOK1Q99704 481 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 DUSP26Q9BV47 211 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 CRISPLD2Q9H0B8 497 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 RIBC2Q9H4K1 309 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 IL1RAPQ9NPH3 570 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 AASSQ9UDR5 926 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 BAG5Q9UL15 447 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 VPS4AQ9UN37 437 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 SLC5A10A0PJK1 596 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 NTRK1P04629 796 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 NUDT7P0C024 238 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 ACPPP15309 386 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 GPX2P18283 190 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 IGFBP5P24593 272 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 DDX6P26196 483 aaKnown RBP eCLIP10.83□□□□□ -0.68
CHMP3-209ENST00000494623 DPY19L1Q2PZI1 675 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 CPTPQ5TA50 214 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 OR2T5Q6IEZ7 315 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 GRHL2Q6ISB3 625 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 SHQ1Q6PI26 577 aaKnown RBP10.83□□□□□ -0.68
CHMP3-209ENST00000494623 DPPA4Q7L190 304 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 GRASPQ7Z6J2 395 aaPredicted RBP10.83□□□□□ -0.68
CHMP3-209ENST00000494623 RASGRP3Q8IV61 690 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 ZNF557Q8N988 423 aaPredicted RBP10.83□□□□□ -0.68
CHMP3-209ENST00000494623 TERB1Q8NA31 727 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 OR7G3Q8NG95 312 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 OR2T29Q8NH02 315 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 HUS1BQ8NHY5 278 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 CNIH3Q8TBE1 160 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 TPD52L3Q96J77 140 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 FOPNLQ96NB1 174 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 DGCR6LQ9BY27 220 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 TPT1P8Q9HAU6 139 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 PREBQ9HCU5 417 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 SH3BP4Q9P0V3 963 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 FBXO10Q9UK96 956 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 CDH7Q9ULB5 785 aa10.83□□□□□ -0.68
CHMP3-209ENST00000494623 GNG14A0A1W2PPG7 69 aa10.82□□□□□ -0.68
CHMP3-209ENST00000494623 H0YIV9 168 aa10.82□□□□□ -0.68
CHMP3-209ENST00000494623 QSOX1O00391 747 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms