RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 Q8NBF4 154 aa4.35□□□□□ -1.71
NCL-210ENST00000494618 OTUB1Q96FW1 271 aaPredicted RBP4.35□□□□□ -1.71
NCL-210ENST00000494618 MUS81Q96NY9 551 aa4.35□□□□□ -1.71
NCL-210ENST00000494618 SLF1Q9BQI6 1058 aa4.35□□□□□ -1.71
NCL-210ENST00000494618 HOXD1Q9GZZ0 328 aa4.35□□□□□ -1.71
NCL-210ENST00000494618 BCCIPQ9P287 314 aaKnown RBP eCLIP4.35□□□□□ -1.71
NCL-210ENST00000494618 TRAV24A0A0B4J272 114 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 TRBV5-5A0A0J9YX44 114 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 SPRY1O43609 319 aaPredicted RBP4.34□□□□□ -1.71
NCL-210ENST00000494618 ATP1B1P05026 303 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 MYBL1P10243 752 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 TLX1P31314 330 aaPredicted RBP4.34□□□□□ -1.71
NCL-210ENST00000494618 MTF1Q14872 753 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 GPR33Q49SQ1 333 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 KRT80Q6KB66 452 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 CTR9Q6PD62 1173 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 METTL4Q8N3J2 472 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 KLHDC1Q8N7A1 406 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 LINC00615Q96LM1 132 aaPredicted RBP4.34□□□□□ -1.71
NCL-210ENST00000494618 CFAP57Q96MR6 1250 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 PRICKLE1Q96MT3 831 aaPredicted RBP4.34□□□□□ -1.71
NCL-210ENST00000494618 LRRC3BQ96PB8 259 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 TDRD1Q9BXT4 1180 aaKnown RBP4.34□□□□□ -1.71
NCL-210ENST00000494618 SLC2A11Q9BYW1 496 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 RPS10P5Q9NQ39 176 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 SLC7A10Q9NS82 523 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 PRDM4Q9UKN5 801 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 ZHX2Q9Y6X8 837 aa4.34□□□□□ -1.71
NCL-210ENST00000494618 A0A1W2PPK0 400 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 ASB14A6NK59 587 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 C2CD4DB7Z1M9 353 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 AP5Z1O43299 807 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 PI15O43692 258 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 CEACAM4O75871 244 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 CELF2O95319 508 aaKnown RBP4.33□□□□□ -1.72
NCL-210ENST00000494618 OR52Z1P0C646 297 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 IL11P20809 199 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 ACHEP22303 614 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 RBMS1P29558 406 aaKnown RBP4.33□□□□□ -1.72
NCL-210ENST00000494618 HSD17B3P37058 310 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 SOX3P41225 446 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 ACSM1Q08AH1 577 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 ILF2Q12905 390 aaKnown RBP4.33□□□□□ -1.72
NCL-210ENST00000494618 TMEM132DQ14C87 1099 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 CST9LP1Q5W188 147 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 SPINK14Q6IE38 97 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 RBPMS2Q6ZRY4 209 aaKnown RBP4.33□□□□□ -1.72
NCL-210ENST00000494618 PLPPR4Q7Z2D5 763 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 ZER1Q7Z7L7 766 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 TLK2Q86UE8 772 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 C9orf43Q8TAL5 461 aaPredicted RBP4.33□□□□□ -1.72
NCL-210ENST00000494618 PIK3R3Q92569 461 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 RASL10AQ92737 203 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 TSACCQ96A04 125 aaPredicted RBP4.33□□□□□ -1.72
NCL-210ENST00000494618 GAL3ST4Q96RP7 486 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 CDCA3Q99618 268 aaPredicted RBP4.33□□□□□ -1.72
NCL-210ENST00000494618 MTHFD2LQ9H903 347 aaPredicted RBP4.33□□□□□ -1.72
NCL-210ENST00000494618 WIPI2Q9Y4P8 454 aa4.33□□□□□ -1.72
NCL-210ENST00000494618 IGHV3OR16-10A0A075B7F0 116 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 TFECO14948 347 aaPredicted RBP4.32□□□□□ -1.72
NCL-210ENST00000494618 ATP6AP2O75787 350 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 CYP11B2P19099 503 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 CD27P26842 260 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 OR3A2P47893 321 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 NONOQ15233 471 aaKnown RBP eCLIP4.32□□□□□ -1.72
NCL-210ENST00000494618 ZNF343Q6P1L6 599 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 GPRIN3Q6ZVF9 776 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 PCGF5Q86SE9 256 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 CATSPERDQ86XM0 798 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 AMER3Q8N944 861 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 XXYLT1Q8NBI6 393 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 KCTD6Q8NC69 237 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 OR2L2Q8NH16 312 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 PGAP3Q96FM1 320 aaPredicted RBP4.32□□□□□ -1.72
NCL-210ENST00000494618 PGM2Q96G03 612 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 SLC45A3Q96JT2 553 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 TRIM6Q9C030 488 aaPredicted RBP4.32□□□□□ -1.72
NCL-210ENST00000494618 SDCBP2Q9H190 292 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 XAB2Q9HCS7 855 aaKnown RBP4.32□□□□□ -1.72
NCL-210ENST00000494618 LNPEPQ9UIQ6 1025 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 ELF5Q9UKW6 265 aaPredicted RBP4.32□□□□□ -1.72
NCL-210ENST00000494618 CSAG2Q9Y5P2 127 aa4.32□□□□□ -1.72
NCL-210ENST00000494618 EPM2AB3EWF7 344 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 GSRP00390 522 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 ADRB2P07550 413 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 CPT2P23786 658 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 CLDN15P56746 228 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 RASGEF1BQ0VAM2 473 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 LY6DQ14210 128 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 ZNF239Q16600 458 aaKnown RBP4.31□□□□□ -1.72
NCL-210ENST00000494618 ERC1Q8IUD2 1116 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 RCOR2Q8IZ40 523 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 OR4D10Q8NGI6 311 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 LRRC15Q8TF66 581 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 SPSB1Q96BD6 273 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 BTBD9Q96Q07 612 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 LGMNQ99538 433 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 ACTL8Q9H568 366 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 DNAJC4Q9NNZ3 241 aa4.31□□□□□ -1.72
NCL-210ENST00000494618 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms