RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 MAGEA12P43365 314 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 GLRBP48167 497 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 CCT5P48643 541 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 SLC18A1P54219 525 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 RAB10P61026 200 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 MAGOHP61326 146 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 DMPKQ09013 629 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 BMPR2Q13873 1038 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 NCF4Q15080 339 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 TSNAXIP1Q2TAA8 658 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 DEFB110Q30KQ9 67 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 TTLL9Q3SXZ7 439 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 TTMPQ5BVD1 217 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 TMTC4Q5T4D3 741 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 MLIPQ5VWP3 458 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 METRNLQ641Q3 311 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 PTRHD1Q6GMV3 140 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 LRRC8EQ6NSJ5 796 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 RAPH1Q70E73 1250 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 MRGPREQ86SM8 312 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 TRIM73Q86UV7 250 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 BPHLQ86WA6 291 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 OOSP2Q86WS3 158 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 KMT5CQ86Y97 462 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 ZGRF1Q86YA3 2104 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 PIANPQ8IYJ0 282 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 FAM76AQ8TAV0 307 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 MZB1Q8WU39 189 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 APOPT1Q96IL0 206 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 AARSD1Q9BTE6 412 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 XKR8Q9H6D3 395 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 ZNF552Q9H707 407 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 NKIRAS1Q9NYS0 192 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 SLC17A6Q9P2U8 582 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 SLC39A10Q9ULF5 831 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 BTRCQ9Y297 605 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 B3GNT3Q9Y2A9 372 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 DOCK10Q96BY6 2186 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 GSAPA4D1B5 854 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 EIF3FO00303 357 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 COPEO14579 308 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 TM9SF1O15321 606 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 PRPF4O43172 522 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 LRRTM2O43300 516 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 ZNF749O43361 778 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 SGTAO43765 313 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 PIAS1O75925 651 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 HAUS5O94927 633 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 ZWINTO95229 277 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 FTH1P02794 183 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 APOA4P06727 396 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 KRT4P19013 534 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 CYP2A7P20853 494 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 FDXRP22570 491 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 PREPP48147 710 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 SRSF11Q05519 484 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 PDAP1Q13442 181 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 SEMA3AQ14563 771 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 ZKSCAN8Q15776 578 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 HECTD2Q5U5R9 776 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 ZNF385CQ66K41 422 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 ARMC6Q6NXE6 501 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 KLC3Q6P597 504 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 CYB5D1Q6P9G0 228 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 KLHL35Q6PF15 583 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 CNSTQ6PJW8 725 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 CDHR3Q6ZTQ4 885 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 MED25Q71SY5 747 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 TBC1D1Q86TI0 1168 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 TMEM102Q8N9M5 508 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 PHC3Q8NDX5 983 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 ARL8AQ96BM9 186 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 LRFN5Q96NI6 719 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 CD180Q99467 661 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 SPRTNQ9H040 489 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 ILKAPQ9H0C8 392 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 KIR3DX1Q9H7L2 352 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 SYTL2Q9HCH5 934 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 FAM60AQ9NP50 221 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 KLHL42Q9P2K6 505 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 TRMT6Q9UJA5 497 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 POMT2Q9UKY4 750 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 CDYLQ9Y232 598 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 CRYL1Q9Y2S2 319 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 VWA7Q9Y334 891 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 PCDHGB7Q9Y5F8 929 aa11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 COPG1Q9Y678 874 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-212ENST00000494610 SNRNP200O75643 2136 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-212ENST00000494610 BTN3A1O00481 513 aa11.29□□□□□ -0.6
CSNK1E-212ENST00000494610 ALDOAP04075 364 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-212ENST00000494610 ATP1B2P14415 290 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-212ENST00000494610 GABRB3P28472 473 aa11.29□□□□□ -0.6
CSNK1E-212ENST00000494610 PRDX3P30048 256 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-212ENST00000494610 FMO4P31512 558 aa11.29□□□□□ -0.6
CSNK1E-212ENST00000494610 HPDP32754 393 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-212ENST00000494610 RGS4P49798 205 aa11.29□□□□□ -0.6
CSNK1E-212ENST00000494610 PPP2R2AP63151 447 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms