RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PSAT1Q9Y617 370 aa31.69■■■□□ 2.66
CBX4-203ENST00000494546 MED13Q9UHV7 2174 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 HAT1O14929 419 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 TSPAN12O95859 305 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 HIST1H2AGP0C0S8 130 aaPredicted RBP31.68■■■□□ 2.66
CBX4-203ENST00000494546 HIST1H2ADP20671 130 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 SAT1P21673 171 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 RAPSNQ13702 412 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 AGTRAPQ6RW13 159 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 PLD3Q8IV08 490 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 HIST1H2AHQ96KK5 128 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 SPSB2Q99619 263 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 HIST1H2AJQ99878 128 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 H2AFJQ9BTM1 129 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 SLC26A1Q9H2B4 701 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 MOCS1Q9NZB8 636 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 CDC23Q9UJX2 597 aa31.68■■■□□ 2.66
CBX4-203ENST00000494546 RUVBL1Q9Y265 456 aaKnown RBP31.68■■■□□ 2.66
CBX4-203ENST00000494546 PABPN1LA6NDY0 278 aaKnown RBP31.67■■■□□ 2.66
CBX4-203ENST00000494546 HKDC1Q2TB90 917 aa31.67■■■□□ 2.66
CBX4-203ENST00000494546 DCAF10Q5QP82 559 aa31.67■■■□□ 2.66
CBX4-203ENST00000494546 PRMT9Q6P2P2 845 aa31.67■■■□□ 2.66
CBX4-203ENST00000494546 CLEC1AQ8NC01 280 aa31.67■■■□□ 2.66
CBX4-203ENST00000494546 NUDT9Q9BW91 350 aa31.67■■■□□ 2.66
CBX4-203ENST00000494546 PCBD2Q9H0N5 130 aa31.67■■■□□ 2.66
CBX4-203ENST00000494546 CLMPQ9H6B4 373 aa31.67■■■□□ 2.66
CBX4-203ENST00000494546 GPR83Q9NYM4 423 aa31.67■■■□□ 2.66
CBX4-203ENST00000494546 NXT1Q9UKK6 140 aaKnown RBP31.67■■■□□ 2.66
CBX4-203ENST00000494546 TNRC6AQ8NDV7 1962 aaKnown RBP31.67■■■□□ 2.66
CBX4-203ENST00000494546 IGHEP01854 428 aa31.66■■■□□ 2.66
CBX4-203ENST00000494546 RELAQ04206 551 aa31.66■■■□□ 2.66
CBX4-203ENST00000494546 NAE1Q13564 534 aa31.66■■■□□ 2.66
CBX4-203ENST00000494546 PYROXD1Q8WU10 500 aa31.66■■■□□ 2.66
CBX4-203ENST00000494546 SAYSD1Q9NPB0 183 aa31.66■■■□□ 2.66
CBX4-203ENST00000494546 ZNF451Q9Y4E5 1061 aa31.66■■■□□ 2.66
CBX4-203ENST00000494546 MASP2O00187 686 aa31.65■■■□□ 2.66
CBX4-203ENST00000494546 MMP11P24347 488 aa31.65■■■□□ 2.66
CBX4-203ENST00000494546 EMP3P54852 163 aa31.65■■■□□ 2.66
CBX4-203ENST00000494546 SLC26A11Q86WA9 606 aa31.65■■■□□ 2.66
CBX4-203ENST00000494546 ZC3HC1Q86WB0 502 aaKnown RBP31.65■■■□□ 2.66
CBX4-203ENST00000494546 TMEM184CQ9NVA4 438 aa31.65■■■□□ 2.66
CBX4-203ENST00000494546 ARL15Q9NXU5 204 aa31.65■■■□□ 2.66
CBX4-203ENST00000494546 FBLP22087 321 aaKnown RBP31.64■■■□□ 2.66
CBX4-203ENST00000494546 OCA2Q04671 838 aa31.64■■■□□ 2.66
CBX4-203ENST00000494546 TRIM54Q9BYV2 358 aa31.64■■■□□ 2.66
CBX4-203ENST00000494546 GRHL1Q9NZI5 618 aa31.64■■■□□ 2.66
CBX4-203ENST00000494546 ZNF282Q9UDV7 671 aaPredicted RBP31.64■■■□□ 2.66
CBX4-203ENST00000494546 CDC14AQ9UNH5 594 aa31.64■■■□□ 2.66
CBX4-203ENST00000494546 SH2B3Q9UQQ2 575 aa31.64■■■□□ 2.66
CBX4-203ENST00000494546 PCDHGB7Q9Y5F8 929 aa31.64■■■□□ 2.66
CBX4-203ENST00000494546 FAM95CA0A1B0GW59 222 aa31.63■■■□□ 2.65
CBX4-203ENST00000494546 VSTM2BA6NLU5 285 aa31.63■■■□□ 2.65
CBX4-203ENST00000494546 AGPSO00116 658 aa31.63■■■□□ 2.65
CBX4-203ENST00000494546 HRH2P25021 359 aa31.63■■■□□ 2.65
CBX4-203ENST00000494546 CBLBQ13191 982 aa31.63■■■□□ 2.65
CBX4-203ENST00000494546 DUPD1Q68J44 220 aa31.63■■■□□ 2.65
CBX4-203ENST00000494546 PRSS58Q8IYP2 241 aa31.63■■■□□ 2.65
CBX4-203ENST00000494546 NSMCE4AQ9NXX6 385 aa31.63■■■□□ 2.65
CBX4-203ENST00000494546 UTP11Q9Y3A2 253 aaKnown RBP31.63■■■□□ 2.65
CBX4-203ENST00000494546 HEATR5BQ9P2D3 2071 aa31.63■■■□□ 2.65
CBX4-203ENST00000494546 TXNDC9O14530 226 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 P2RX6O15547 441 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 PIAS1O75925 651 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 STATHP02808 62 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 CCND1P24385 295 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 SSTR1P30872 391 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 IGFBP7Q16270 282 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 NADK2Q4G0N4 442 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 GARNL3Q5VVW2 1013 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 TMEM207Q6UWW9 146 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 C17orf64Q86WR6 236 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 GALNT16Q8N428 558 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 STT3BQ8TCJ2 826 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 NACC2Q96BF6 587 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 MIEF2Q96C03 454 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 YIPF2Q9BWQ6 316 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 SGPP1Q9BX95 441 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 FBXL4Q9UKA2 621 aa31.62■■■□□ 2.65
CBX4-203ENST00000494546 GUCA1CO95843 209 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 AP1S2P56377 157 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 ZNF460Q14592 562 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 RBBP7Q16576 425 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 CAPN13Q6MZZ7 669 aaPredicted RBP31.61■■■□□ 2.65
CBX4-203ENST00000494546 LCTLQ6UWM7 567 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 PYCR2Q96C36 320 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 CRB3Q9BUF7 120 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 ATP13A2Q9NQ11 1180 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 SMYD2Q9NRG4 433 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 SEMA3GQ9NS98 782 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 IKZF3Q9UKT9 509 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 HS3ST3B1Q9Y662 390 aa31.61■■■□□ 2.65
CBX4-203ENST00000494546 SOCS6O14544 535 aa31.6■■■□□ 2.65
CBX4-203ENST00000494546 EIF3HO15372 352 aaKnown RBP eCLIP31.6■■■□□ 2.65
CBX4-203ENST00000494546 ZGLP1P0C6A0 271 aa31.6■■■□□ 2.65
CBX4-203ENST00000494546 ZNF37AP17032 561 aaPredicted RBP31.6■■■□□ 2.65
CBX4-203ENST00000494546 MLLT10P55197 1068 aa31.6■■■□□ 2.65
CBX4-203ENST00000494546 RPS15AP62244 130 aaKnown RBP31.6■■■□□ 2.65
CBX4-203ENST00000494546 CSNK1G2P78368 415 aa31.6■■■□□ 2.65
CBX4-203ENST00000494546 KLC1Q07866 573 aa31.6■■■□□ 2.65
CBX4-203ENST00000494546 MVB12AQ96EY5 273 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms