RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 SOX11P35716 441 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 VPS41P49754 854 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 ST13P50502 369 aaKnown RBP12.01□□□□□ -0.49
SKA1-205ENST00000494518 TNFSF10P50591 281 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 TDGF1P3P51864 188 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 EFNA3P52797 238 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 PMP22Q01453 160 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 KCNJ11Q14654 390 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 TRIP13Q15645 432 aaPredicted RBP12.01□□□□□ -0.49
SKA1-205ENST00000494518 KLHL38Q2WGJ6 581 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 LRRC8BQ6P9F7 803 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 GFRALQ6UXV0 394 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 GSTA5Q7RTV2 222 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 TXLNBQ8N3L3 684 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 MPP5Q8N3R9 675 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 AMER3Q8N944 861 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 MAGEC3Q8TD91 643 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 PKP4Q99569 1192 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 SLC30A3Q99726 388 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 PLCD4Q9BRC7 762 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 IL22Q9GZX6 179 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 EIF2B3Q9NR50 452 aaKnown RBP12.01□□□□□ -0.49
SKA1-205ENST00000494518 ENAMQ9NRM1 1142 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 MRPS2Q9Y399 296 aaKnown RBP12.01□□□□□ -0.49
SKA1-205ENST00000494518 MRFAP1Q9Y605 127 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 FBN2P35556 2912 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 OTOGQ6ZRI0 2925 aa12.01□□□□□ -0.49
SKA1-205ENST00000494518 TACC2O95359 2948 aa12□□□□□ -0.49
SKA1-205ENST00000494518 DCHS2Q6V1P9 2916 aa12□□□□□ -0.49
SKA1-205ENST00000494518 F8P00451 2351 aa12□□□□□ -0.49
SKA1-205ENST00000494518 IGLV3-12A0A075B6K2 115 aa12□□□□□ -0.49
SKA1-205ENST00000494518 IGHV1-45A0A0A0MS14 117 aa12□□□□□ -0.49
SKA1-205ENST00000494518 IGHV3-20A0A0C4DH32 117 aa12□□□□□ -0.49
SKA1-205ENST00000494518 E5RI56 91 aa12□□□□□ -0.49
SKA1-205ENST00000494518 HNRNPRO43390 633 aaKnown RBP12□□□□□ -0.49
SKA1-205ENST00000494518 AVILO75366 819 aa12□□□□□ -0.49
SKA1-205ENST00000494518 WFS1O76024 890 aa12□□□□□ -0.49
SKA1-205ENST00000494518 WDPCPO95876 746 aa12□□□□□ -0.49
SKA1-205ENST00000494518 SYF2O95926 243 aaKnown RBP12□□□□□ -0.49
SKA1-205ENST00000494518 SERPINA7P05543 415 aa12□□□□□ -0.49
SKA1-205ENST00000494518 ANXA5P08758 320 aa12□□□□□ -0.49
SKA1-205ENST00000494518 ERGP11308 486 aa12□□□□□ -0.49
SKA1-205ENST00000494518 GRNP28799 593 aaKnown RBP12□□□□□ -0.49
SKA1-205ENST00000494518 NPY2RP49146 381 aa12□□□□□ -0.49
SKA1-205ENST00000494518 PNLIPRP1P54315 467 aa12□□□□□ -0.49
SKA1-205ENST00000494518 CUL1Q13616 776 aa12□□□□□ -0.49
SKA1-205ENST00000494518 GBX1Q14549 363 aa12□□□□□ -0.49
SKA1-205ENST00000494518 PCOLCEQ15113 449 aa12□□□□□ -0.49
SKA1-205ENST00000494518 RPS6KA1Q15418 735 aa12□□□□□ -0.49
SKA1-205ENST00000494518 TYSND1Q2T9J0 566 aa12□□□□□ -0.49
SKA1-205ENST00000494518 ANKRD20A4Q4UJ75 823 aa12□□□□□ -0.49
SKA1-205ENST00000494518 ICE2Q659A1 982 aa12□□□□□ -0.49
SKA1-205ENST00000494518 ZNF324BQ6AW86 544 aaPredicted RBP12□□□□□ -0.49
SKA1-205ENST00000494518 SP5Q6BEB4 398 aaPredicted RBP12□□□□□ -0.49
SKA1-205ENST00000494518 MRNIPQ6NTE8 343 aa12□□□□□ -0.49
SKA1-205ENST00000494518 HIBCHQ6NVY1 386 aaPredicted RBP12□□□□□ -0.49
SKA1-205ENST00000494518 SDCCAG8Q86SQ7 713 aaPredicted RBP12□□□□□ -0.49
SKA1-205ENST00000494518 ZC3H7AQ8IWR0 971 aaKnown RBP12□□□□□ -0.49
SKA1-205ENST00000494518 SMPDL3AQ92484 453 aa12□□□□□ -0.49
SKA1-205ENST00000494518 NR4A3Q92570 626 aa12□□□□□ -0.49
SKA1-205ENST00000494518 RERGQ96A58 199 aaPredicted RBP12□□□□□ -0.49
SKA1-205ENST00000494518 COPG2Q9UBF2 871 aa12□□□□□ -0.49
SKA1-205ENST00000494518 CDC14AQ9UNH5 594 aa12□□□□□ -0.49
SKA1-205ENST00000494518 TRAV17A0A0B4J275 112 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 TRGV8A0A0C4DH27 118 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 A0A1B0GUH1 482 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 OR2W5A6NFC9 320 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 MYO1CO00159 1063 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 SMAPO00193 183 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 PCDH17O14917 1159 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 HAT1O14929 419 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 FOXS1O43638 330 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 PSIP1O75475 530 aaKnown RBP11.99□□□□□ -0.49
SKA1-205ENST00000494518 SEC24DO94855 1032 aaPredicted RBP11.99□□□□□ -0.49
SKA1-205ENST00000494518 UNC5CO95185 931 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 BMP10O95393 424 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 SLC16A8O95907 504 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 CATP04040 527 aaKnown RBP11.99□□□□□ -0.49
SKA1-205ENST00000494518 SNRPB2P08579 225 aaKnown RBP11.99□□□□□ -0.49
SKA1-205ENST00000494518 PKMP14618 531 aaKnown RBP11.99□□□□□ -0.49
SKA1-205ENST00000494518 MST1P26927 711 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 SLC26A3P40879 764 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 ZNF33BQ06732 778 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 NAA30Q147X3 362 aaPredicted RBP11.99□□□□□ -0.49
SKA1-205ENST00000494518 THEMIS2Q5TEJ8 643 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 MFSD4BQ5TF39 518 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 FCRLBQ6BAA4 426 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 ZNF425Q6IV72 752 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 RPUSD3Q6P087 351 aaKnown RBP11.99□□□□□ -0.49
SKA1-205ENST00000494518 CASC4Q6P4E1 433 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 LANCL3Q6ZV70 420 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 NEK10Q6ZWH5 1172 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 CENPUQ71F23 418 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 RNF10Q8N5U6 811 aaKnown RBP11.99□□□□□ -0.49
SKA1-205ENST00000494518 GIMAP7Q8NHV1 300 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 OR2A5Q96R48 311 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 MACROD1Q9BQ69 325 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 KIFC1Q9BW19 673 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 DRC3Q9H069 523 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 MKKSQ9NPJ1 570 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms