RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CD27P26842 260 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 RPL10P27635 214 aaKnown RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 GSTM2P28161 218 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 PTPN6P29350 595 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 HNRNPH1P31943 449 aaKnown RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 SLC19A1P41440 591 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 HALP42357 657 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 NUDT2P50583 147 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 PSME3P61289 254 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 UBE2IP63279 158 aaKnown RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 PHC1P78364 1004 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 RAE1P78406 368 aaKnown RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 ABATP80404 500 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 HMGCS1Q01581 520 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 TRAP1Q12931 704 aaKnown RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 CUL3Q13618 768 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 NR6A1Q15406 480 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 ADPRMQ3LIE5 342 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 PLA2G4EQ3MJ16 856 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 VPS26BQ4G0F5 336 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 PAGE2BQ5JRK9 111 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 PAGE3Q5JUK9 113 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 TMEM31Q5JXX7 168 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 PRAMEF14Q5SWL7 426 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 CATSPEREQ5SY80 951 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 LRIF1Q5T3J3 769 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 PRAMEF13Q5VWM6 474 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 ZNF425Q6IV72 752 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 NOXRED1Q6NXP6 359 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 MED27Q6P2C8 311 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 AAGABQ6PD74 315 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 RIPOR1Q6ZS17 1223 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 PACS2Q86VP3 889 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 C17orf82Q86X59 251 aaPredicted RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 SLC15A3Q8IY34 581 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 SYTL1Q8IYJ3 562 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 METTL4Q8N3J2 472 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 LMNTD1Q8N9Z9 388 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 ANKK1Q8NFD2 765 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 OR13H1Q8NG92 308 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 OR8J2Q8NGG1 315 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 HUS1BQ8NHY5 278 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 MCUR1Q96AQ8 359 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 ZNF775Q96BV0 537 aaPredicted RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 CLPTM1LQ96KA5 538 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 C12orf66Q96MD2 445 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 CDRT15Q96T59 188 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 SERPINI1Q99574 410 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 NPAS2Q99743 824 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 ZNF717Q9BY31 904 aaPredicted RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 FOXQ1Q9C009 403 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 TMEM168Q9H0V1 697 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 DCLRE1BQ9H816 532 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 CARS2Q9HA77 564 aaKnown RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 RNPEPL1Q9HAU8 725 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 SERHLQ9NQF3 203 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 PRDM8Q9NQV8 689 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 PRDM6Q9NQX0 595 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 LEF1Q9UJU2 399 aaPredicted RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 G3BP2Q9UN86 482 aaKnown RBP6.54□□□□□ -1.36
MSH5-217ENST00000494458 CYP8B1Q9UNU6 501 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 MAPRE3Q9UPY8 281 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 ICKQ9UPZ9 632 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 KCNK6Q9Y257 313 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 CA5BQ9Y2D0 317 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 DLGAP4Q9Y2H0 992 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 COLEC10Q9Y6Z7 277 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 LRP4O75096 1905 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 TRIOO75962 3097 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 PIPSLA2A3N6 862 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 FAM221BA6H8Z2 402 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 PRR23AA6NEV1 266 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 PRORSD1PA6NEY8 169 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 MEI4A8MW99 385 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 TRIM38O00635 465 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 CFLARO15519 480 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 MAP3K7O43318 606 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 ENTPD5O75356 428 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 SEC22BO75396 215 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 BCAS2O75934 225 aaPredicted RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 FKBP9O95302 570 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 TNFP01375 233 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 LMNAP02545 664 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 WNT1P04628 370 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 EZRP15311 586 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 SDC1P18827 310 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 TACR1P25103 407 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 PTX3P26022 381 aaPredicted RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 MAPK1P28482 360 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 PEBP1P30086 187 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 THOP1P52888 689 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 CLNS1AP54105 237 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 WNT3P56703 355 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 RPL38P63173 70 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 RACK1P63244 317 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 YBX1P67809 324 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 CSNK1G2P78368 415 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 REEP5Q00765 189 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 MS4A2Q01362 244 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 ART3Q13508 389 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms