RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CCNB1P14635 433 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 KELP23276 732 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 GATA3P23771 443 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 CD82P27701 267 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 SERPINA4P29622 427 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 MAPK9P45984 424 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 NSFP46459 744 aaKnown RBP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 LIMK2P53671 638 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 KIAA1024LP59773 190 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 TPI1P60174 286 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 POLR2FP61218 127 aaKnown RBP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 POLR2LP62875 67 aaKnown RBP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 DGCR2P98153 550 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 BCL2L1Q07817 233 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 NSUN2Q08J23 767 aaKnown RBP eCLIP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 ILF3Q12906 894 aaKnown RBP eCLIP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 TP53BP2Q13625 1128 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 E2F2Q14209 437 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 CA9Q16790 459 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 DEFB109BQ30KR1 87 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 PARP15Q460N3 678 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 ATP1A1-AS1Q5TC04 95 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 ABHD17BQ5VST6 288 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 ICE2Q659A1 982 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 DOK6Q6PKX4 331 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 RFLNAQ6ZTI6 216 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 DPPA4Q7L190 304 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 HEATR4Q86WZ0 1026 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 C17orf82Q86X59 251 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 FAM114A1Q8IWE2 563 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 NAGSQ8N159 534 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 FAM109AQ8N4B1 249 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 MLKLQ8NB16 471 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 PROKR1Q8TCW9 393 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 PDCD6IPQ8WUM4 868 aaKnown RBP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 NTAN1Q96AB6 310 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 PTCD3Q96EY7 689 aaKnown RBP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 PRPF18Q99633 342 aaKnown RBP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 GSDMCQ9BYG8 508 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 VPS16Q9H269 839 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 ADNPQ9H2P0 1102 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 LRRC19Q9H756 370 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 WDR26Q9H7D7 661 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 ATP13A3Q9H7F0 1226 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 CATSPERBQ9H7T0 1116 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 PDFQ9HBH1 243 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 ZBTB26Q9HCK0 441 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 FAM207AQ9NSI2 230 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 SEPT11Q9NVA2 429 aaKnown RBP5.09□□□□□ -1.59
PTCD3-219ENST00000494323 TAB2Q9NYJ8 693 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 PCSK1NQ9UHG2 260 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 PILRAQ9UKJ1 303 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 SUFUQ9UMX1 484 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 ESPL1Q14674 2120 aa5.09□□□□□ -1.59
PTCD3-219ENST00000494323 IGHV1OR21-1A0A087WYE8 117 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 PIPSLA2A3N6 862 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 ARHGAP42A6NI28 874 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 NPIPB8E9PQR5 432 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 K7EM74 188 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 EIF3FO00303 357 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-219ENST00000494323 EEF2KO00418 725 aaKnown RBP5.08□□□□□ -1.6
PTCD3-219ENST00000494323 ZW10O43264 779 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 RAD1O60671 282 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 FAM155BO75949 473 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 CALB1P05937 261 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 GP1BBP13224 206 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 TNFAIP3P21580 790 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 ACTR1BP42025 376 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 CSNK1DP48730 415 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 NDST2P52849 883 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 MLLT10P55197 1068 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 ACTR1AP61163 376 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 OGDHQ02218 1023 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 SLC10A7Q0GE19 358 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 CNGA3Q16281 694 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 TIGD6Q17RP2 521 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 PTCHD3Q3KNS1 767 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 DPCR1Q3MIW9 517 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 TCP11X2Q5H9J9 407 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 DCAF12Q5T6F0 453 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 CACHD1Q5VU97 1274 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 ABLIM2Q6H8Q1 611 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 DCUN1D2Q6PH85 259 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 MARK2Q7KZI7 788 aaKnown RBP5.08□□□□□ -1.6
PTCD3-219ENST00000494323 TIPARPQ7Z3E1 657 aaKnown RBP5.08□□□□□ -1.6
PTCD3-219ENST00000494323 KDELC2Q7Z4H8 507 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 HSD11B1LQ7Z5J1 315 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 MRGPREQ86SM8 312 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 TRIM74Q86UV6 250 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 MOGAT3Q86VF5 341 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 ZNF677Q86XU0 584 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 LNX2Q8N448 690 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTCD3-219ENST00000494323 ARFGAP1Q8N6T3 406 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 TEX19Q8NA77 164 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 OR4D9Q8NGE8 314 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 C9orf43Q8TAL5 461 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-219ENST00000494323 KIAA1524Q8TCG1 905 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 NCSTNQ92542 709 aa5.08□□□□□ -1.6
PTCD3-219ENST00000494323 FAM136AQ96C01 138 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms