RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 C9orf43Q8TAL5 461 aaPredicted RBP11.15□□□□□ -0.63
RFC4-214ENST00000494047 FAM110BQ8TC76 370 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 HCAR2Q8TDS4 363 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 ASB11Q8WXH4 323 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 MYDGFQ969H8 173 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 FKBP10Q96AY3 582 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 IGSF21Q96ID5 467 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 FOPNLQ96NB1 174 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 GABARAPL3Q9BY60 117 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 MROQ9BYG7 248 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 AMBRA1Q9C0C7 1298 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 SERHLQ9NQF3 203 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 KRT84Q9NSB2 600 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 PLCXD1Q9NUJ7 323 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 SIRT5Q9NXA8 310 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 ELOVL2Q9NXB9 296 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 HECAQ9UBI9 543 aaPredicted RBP11.15□□□□□ -0.63
RFC4-214ENST00000494047 INTS6Q9UL03 887 aaKnown RBP11.15□□□□□ -0.63
RFC4-214ENST00000494047 FCF1Q9Y324 198 aaKnown RBP11.15□□□□□ -0.63
RFC4-214ENST00000494047 SH3BP1Q9Y3L3 701 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 V9GYQ6 96 aa11.15□□□□□ -0.63
RFC4-214ENST00000494047 KCNE1BA0A087WTH5 132 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 ARRDC5A6NEK1 342 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 H0YIV9 168 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 GFYI3L273 518 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 TAF4O00268 1085 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 PRRG1O14668 218 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 ZNF197O14709 1029 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 FFAR3O14843 346 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 GRM6O15303 877 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 GPR42O15529 346 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 POP4O95707 220 aaKnown RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 PDYNP01213 254 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 CATP04040 527 aaKnown RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 SEMG1P04279 462 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 PCNAP12004 261 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 ANXA8P13928 327 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 TCF3P15923 654 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 ZNF182P17025 639 aaPredicted RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 AMD1P17707 334 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 SDC1P18827 310 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 DDX6P26196 483 aaKnown RBP eCLIP11.14□□□□□ -0.63
RFC4-214ENST00000494047 KRT20P35900 424 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 UGT2B10P36537 528 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 ACSM2AQ08AH3 577 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 EIF4HQ15056 248 aaKnown RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 TBCEQ15813 527 aaPredicted RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 CHRNA6Q15825 494 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 PHKG1Q16816 387 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 ACSM2BQ68CK6 577 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 GRHL2Q6ISB3 625 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 CES5AQ6NT32 575 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 NOXRED1Q6NXP6 359 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 GALNT18Q6P9A2 607 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 SUSD1Q6UWL2 747 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 RSPO2Q6UXX9 243 aaPredicted RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 RTL10Q7L3V2 364 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 ADCK1Q86TW2 530 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 LACC1Q8IV20 430 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 P3H2Q8IVL5 708 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 CENPSQ8N2Z9 138 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 TMCO5AQ8N6Q1 288 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 FBXO15Q8NCQ5 510 aaPredicted RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 ABHD11Q8NFV4 315 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 GLMNQ92990 594 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 ESAMQ96AP7 390 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 MTERF3Q96E29 417 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 TMEM169Q96HH4 297 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 LRIG1Q96JA1 1093 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 ZNF558Q96NG5 402 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 PANX1Q96RD7 426 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 ZSCAN5AQ9BUG6 496 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 THG1LQ9NWX6 298 aaKnown RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 VPS29Q9UBQ0 182 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 TMEFF2Q9UIK5 374 aaPredicted RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 NDRG4Q9ULP0 352 aaKnown RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 WDR37Q9Y2I8 494 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 WBP11Q9Y2W2 641 aaKnown RBP11.14□□□□□ -0.63
RFC4-214ENST00000494047 PCDHB11Q9Y5F2 797 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 PCDHGB3Q9Y5G1 929 aa11.14□□□□□ -0.63
RFC4-214ENST00000494047 CUL9Q8IWT3 2517 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 PNMA8CA0A1B0GUJ8 204 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 FUOMA2VDF0 154 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 IQCF5A8MTL0 148 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 CLIC1O00299 241 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 CACNB4O00305 520 aaPredicted RBP11.13□□□□□ -0.63
RFC4-214ENST00000494047 FPGTO14772 594 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 TSPAN3O60637 253 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 BCAS1O75363 584 aaPredicted RBP11.13□□□□□ -0.63
RFC4-214ENST00000494047 IRF1P10914 325 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 ATP1B2P14415 290 aaPredicted RBP11.13□□□□□ -0.63
RFC4-214ENST00000494047 MZF1P28698 734 aaPredicted RBP11.13□□□□□ -0.63
RFC4-214ENST00000494047 KDELR2P33947 212 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 PCGF2P35227 344 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 RECQLP46063 649 aaPredicted RBP11.13□□□□□ -0.63
RFC4-214ENST00000494047 GSTM5P46439 218 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 ALDH9A1P49189 494 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 GATMP50440 423 aa11.13□□□□□ -0.63
RFC4-214ENST00000494047 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
RFC4-214ENST00000494047 CTBSQ01459 385 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms