RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 E7EQ34 232 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 TM4SF5O14894 197 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 KRT6AP02538 564 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 KRT6BP04259 564 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 HMOX2P30519 316 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 GRIA3P42263 894 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 KRT6CP48668 564 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 SKP1P63208 163 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 PCDH1Q08174 1060 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 IFT88Q13099 833 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 STX3Q13277 289 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 TUBB8Q3ZCM7 444 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 GGTA1PQ4G0N0 100 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 FBXO48Q5FWF7 155 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 HES3Q5TGS1 186 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 GRHL2Q6ISB3 625 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 ALYREFQ86V81 257 aaKnown RBP14.34□□□□□ -0.11
ACTB-213ENST00000493945 BPHLQ86WA6 291 aaPredicted RBP14.34□□□□□ -0.11
ACTB-213ENST00000493945 OR8K5Q8NH50 307 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 TRPC4APQ8TEL6 797 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 ESAMQ96AP7 390 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 TRAPPC9Q96Q05 1148 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 ZFYVE21Q9BQ24 234 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 MECRQ9BV79 373 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 SLC29A3Q9BZD2 475 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 C12orf65Q9H3J6 166 aaKnown RBP14.34□□□□□ -0.11
ACTB-213ENST00000493945 MANSC1Q9H8J5 431 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 IRAK4Q9NWZ3 460 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 TRPS1Q9UHF7 1281 aa14.34□□□□□ -0.11
ACTB-213ENST00000493945 SNRNP200O75643 2136 aaKnown RBP14.33□□□□□ -0.11
ACTB-213ENST00000493945 IGHV5-10-1A0A0J9YXX1 117 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 TRBC2A0A5B9 178 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 OR2A25A4D2G3 310 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 URADA6NGE7 173 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 SLC9B1P1A6NJY1 282 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 H7BY64 318 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 KLF11O14901 512 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 ESRRBO95718 433 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 MT-CO3P00414 261 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 SLC35G6P0C7Q6 338 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 MSL3P1P0C860 447 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 HGFP14210 728 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 JUPP14923 745 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 NELFEP18615 380 aaKnown RBP14.33□□□□□ -0.12
ACTB-213ENST00000493945 CASP2P42575 452 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 ATP1A2P50993 1020 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 HK2P52789 917 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 REEP5Q00765 189 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 INSM1Q01101 510 aaPredicted RBP14.33□□□□□ -0.12
ACTB-213ENST00000493945 ZNF33BQ06732 778 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 SLBPQ14493 270 aaKnown RBP eCLIP14.33□□□□□ -0.12
ACTB-213ENST00000493945 C18orf21Q32NC0 220 aaPredicted RBP14.33□□□□□ -0.12
ACTB-213ENST00000493945 UNC50Q53HI1 259 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 TCTE1Q5JU00 501 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 KIAA1614Q5VZ46 1190 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 MED27Q6P2C8 311 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 DHRS13Q6UX07 377 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 TMIGD1Q6UXZ0 262 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 TRIM73Q86UV7 250 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 SLITRK4Q8IW52 837 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 GPR135Q8IZ08 494 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 CCT6BQ92526 530 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 WDR34Q96EX3 536 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 LIN37Q96GY3 246 aaPredicted RBP14.33□□□□□ -0.12
ACTB-213ENST00000493945 FAR2Q96K12 515 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 PRAP1Q96NZ9 151 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 OR4K3Q96R72 315 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 GATA5Q9BWX5 397 aaPredicted RBP14.33□□□□□ -0.12
ACTB-213ENST00000493945 ELOVL6Q9H5J4 265 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 NT5DC2Q9H857 520 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 MID1IP1Q9NPA3 183 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 THAP1Q9NVV9 213 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 SEMA5BQ9P283 1151 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 PLCL2Q9UPR0 1127 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 CEP250Q9BV73 2442 aa14.33□□□□□ -0.12
ACTB-213ENST00000493945 CCDC187A0A096LP49 1063 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 ANKDD1BA6NHY2 528 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 A8MU76 341 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 SRPX2O60687 465 aaPredicted RBP14.32□□□□□ -0.12
ACTB-213ENST00000493945 CSO75390 466 aaKnown RBP14.32□□□□□ -0.12
ACTB-213ENST00000493945 DKK1O94907 266 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 FGF3P11487 239 aaPredicted RBP14.32□□□□□ -0.12
ACTB-213ENST00000493945 ST6GAL1P15907 406 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 BGNP21810 368 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 AHRP35869 848 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 SEPHS1P49903 392 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 CDH13P55290 713 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 WDR4P57081 412 aaKnown RBP14.32□□□□□ -0.12
ACTB-213ENST00000493945 RAB15P59190 212 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 ABCE1P61221 599 aaKnown RBP14.32□□□□□ -0.12
ACTB-213ENST00000493945 ZFP36L1Q07352 338 aaKnown RBP14.32□□□□□ -0.12
ACTB-213ENST00000493945 RGS1Q08116 209 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 TGM3Q08188 693 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 MPP2Q14168 576 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 ISXQ2M1V0 245 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 CDCP2Q5VXM1 449 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 ZNF425Q6IV72 752 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 NIPAL1Q6NVV3 410 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 SLCO4C1Q6ZQN7 724 aa14.32□□□□□ -0.12
ACTB-213ENST00000493945 ARHGAP22Q7Z5H3 698 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms