RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 UMPSP11172 480 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 JUPP14923 745 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 PRPH2P23942 346 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 PBLDP30039 288 aaPredicted RBP13.34□□□□□ -0.27
VCP-207ENST00000493886 TUBA1BP68363 451 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 LAPTM5Q13571 262 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 FRG2Q64ET8 278 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 ANKRD34AQ69YU3 496 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 GLYATQ6IB77 296 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 TUBA1AQ71U36 451 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 HS3ST5Q8IZT8 346 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 PACRGLQ8N7B6 248 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 FGF13Q92913 245 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 CMTM7Q96FZ5 175 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 MAGEB10Q96LZ2 347 aaPredicted RBP13.34□□□□□ -0.27
VCP-207ENST00000493886 MUS81Q96NY9 551 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 FRG2BQ96QU4 278 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 CERS4Q9HA82 394 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 H3BMQ9 156 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 CATP04040 527 aaKnown RBP13.34□□□□□ -0.27
VCP-207ENST00000493886 PRPS2P11908 318 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 NR4A1P22736 598 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 POLR2IP36954 125 aaKnown RBP13.34□□□□□ -0.27
VCP-207ENST00000493886 NRIP1P48552 1158 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 IRF8Q02556 426 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 CHD9Q3L8U1 2897 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 CYP2U1Q7Z449 544 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 SPRED1Q7Z699 444 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 THOC6Q86W42 341 aaKnown RBP13.34□□□□□ -0.27
VCP-207ENST00000493886 SFTPA1Q8IWL2 248 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 DTWD1Q8N5C7 304 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 LILRB1Q8NHL6 650 aaPredicted RBP13.34□□□□□ -0.27
VCP-207ENST00000493886 FBXO30Q8TB52 745 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 THAP11Q96EK4 314 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 NSMCE2Q96MF7 247 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 COG8Q96MW5 612 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 OR52E6Q96RD3 313 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 MAGEL2Q9UJ55 1249 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 UTS2RQ9UKP6 389 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 TMCC3Q9ULS5 477 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 LRRK1Q38SD2 2015 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 C2orf16Q68DN1 1984 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 PLK4O00444 970 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 RECQL5O94762 991 aaPredicted RBP13.33□□□□□ -0.27
VCP-207ENST00000493886 SOD1P00441 154 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 BDKRB1P46663 353 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 RXRGP48443 463 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 CLDN8P56748 225 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 ELP6Q0PNE2 266 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 BNIP3Q12983 259 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 EIF4HQ15056 248 aaKnown RBP13.33□□□□□ -0.27
VCP-207ENST00000493886 CCSMST1Q4G0I0 132 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 WDR45BQ5MNZ6 344 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 STK32CQ86UX6 486 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 CLEC4FQ8N1N0 589 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 ATL1Q8WXF7 558 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 FIG4Q92562 907 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 APIPQ96GX9 242 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 CCDC138Q96M89 665 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 IER2Q9BTL4 223 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 ADNPQ9H2P0 1102 aa13.33□□□□□ -0.27
VCP-207ENST00000493886 STOX2Q9P2F5 926 aaPredicted RBP13.33□□□□□ -0.27
VCP-207ENST00000493886 IFT80Q9P2H3 777 aaPredicted RBP13.33□□□□□ -0.27
VCP-207ENST00000493886 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.33□□□□□ -0.27
VCP-207ENST00000493886 SERTM1A2A2V5 107 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 NPIPB8E9PQR5 432 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 AREL1O15033 823 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 FCGR1AP12314 374 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 PORP16435 677 aaPredicted RBP13.33□□□□□ -0.28
VCP-207ENST00000493886 IL7RP16871 459 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 FSHRP23945 695 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 PDHA2P29803 388 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 ERVK-21P61565 698 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 CTAG1AP78358 180 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 NAE1Q13564 534 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 ELAVL3Q14576 367 aaKnown RBP13.33□□□□□ -0.28
VCP-207ENST00000493886 ZNF234Q14588 700 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 LIPJQ5W064 366 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 AGTRAPQ6RW13 159 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 NLRP8Q86W28 1048 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 SLC22A15Q8IZD6 547 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 PAPD5Q8NDF8 572 aaKnown RBP13.33□□□□□ -0.28
VCP-207ENST00000493886 ZNF583Q96ND8 569 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 SAMD11Q96NU1 681 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 TSSK3Q96PN8 268 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 TBCDQ9BTW9 1192 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 OSBPL6Q9BZF3 934 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 SFXN1Q9H9B4 322 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 K7ESM1 405 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 UGDHO60701 494 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 ALBP02768 609 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 ADRB3P13945 408 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 CD22P20273 847 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 TACR1P25103 407 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 MAPK1P28482 360 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 SHMT2P34897 504 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 PIGFQ07326 219 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 DUSP6Q16828 381 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 XKR6Q5GH73 641 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 PATL1Q86TB9 770 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms