RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ESAMQ96AP7 390 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 KIAA1143Q96AT1 154 aaPredicted RBP13.38□□□□□ -0.27
CCM2-217ENST00000492883 GPR78Q96P69 363 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 ATOH8Q96SQ7 321 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 LHX9Q9NQ69 397 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 STARD5Q9NSY2 213 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 TXLNGQ9NUQ3 528 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 NUDT4Q9NZJ9 180 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 PTBP2Q9UKA9 531 aaKnown RBP13.38□□□□□ -0.27
CCM2-217ENST00000492883 RAB21Q9UL25 225 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 SH2B3Q9UQQ2 575 aa13.38□□□□□ -0.27
CCM2-217ENST00000492883 LOC101059948A0A1B0GTJ6 334 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 TLDC2A0PJX2 215 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 H0YGG7 62 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 H3BMH7 237 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 GOLGA8RI6L899 631 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 MEN1O00255 615 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 MAP2K7O14733 419 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 HAT1O14929 419 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 CCNT2O60583 730 aaKnown RBP13.37□□□□□ -0.27
CCM2-217ENST00000492883 STK16O75716 305 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 IPO13O94829 963 aaKnown RBP13.37□□□□□ -0.27
CCM2-217ENST00000492883 GFAPP14136 432 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 KRT15P19012 456 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 AGXTP21549 392 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 GGT5P36269 586 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 ARSFP54793 590 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 UCNP55089 124 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 ARF3P61204 181 aaPredicted RBP13.37□□□□□ -0.27
CCM2-217ENST00000492883 CSNK1G2P78368 415 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 GPS2Q13227 327 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 SRSF6Q13247 344 aaKnown RBP13.37□□□□□ -0.27
CCM2-217ENST00000492883 COL9A2Q14055 689 aaPredicted RBP13.37□□□□□ -0.27
CCM2-217ENST00000492883 FAM214AQ32MH5 1076 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 CATSPEREQ5SY80 951 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 CCDC81Q6ZN84 652 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 TDRPQ86YL5 185 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 TBC1D19Q8N5T2 526 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 SNX31Q8N9S9 440 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 NEIL2Q969S2 332 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 LRFN5Q96NI6 719 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 OR2A5Q96R48 311 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 EFHD1Q9BUP0 239 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 CAPS2Q9BXY5 557 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 GPN2Q9H9Y4 310 aaPredicted RBP13.37□□□□□ -0.27
CCM2-217ENST00000492883 PCMTD2Q9NV79 361 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 DNAJC11Q9NVH1 559 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 ZNF358Q9NW07 568 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 SRPK3Q9UPE1 567 aa13.37□□□□□ -0.27
CCM2-217ENST00000492883 FEZF1A0PJY2 475 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 HYKKA2RU49 373 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 TXNDC9O14530 226 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 H2AFYO75367 372 aaKnown RBP13.36□□□□□ -0.27
CCM2-217ENST00000492883 KATNA1O75449 491 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 NUDT17P0C025 328 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 LIFP15018 202 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 GNAZP19086 355 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 TCN2P20062 427 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 DLSTP36957 453 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 STAT5AP42229 794 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 SLC6A12P48065 614 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 TMPRSS3P57727 454 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 RPS15AP62244 130 aaKnown RBP13.36□□□□□ -0.27
CCM2-217ENST00000492883 MEF2AQ02078 507 aaPredicted RBP13.36□□□□□ -0.27
CCM2-217ENST00000492883 PFKFB4Q16877 469 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 C1orf189Q5VU69 101 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 YOD1Q5VVQ6 348 aaPredicted RBP13.36□□□□□ -0.27
CCM2-217ENST00000492883 RHBDD2Q6NTF9 364 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 FAM199XQ6PEV8 388 aaPredicted RBP13.36□□□□□ -0.27
CCM2-217ENST00000492883 NXPE4Q6UWF7 544 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 TTLL10Q6ZVT0 673 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 TMPRSS11BQ86T26 416 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 KLHDC8AQ8IYD2 350 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 DSELQ8IZU8 1212 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 CSNK1A1LQ8N752 337 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 ZSCAN1Q8NBB4 408 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 ABHD11Q8NFV4 315 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 OR2W6PQ8NHA6 318 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 ACMSDQ8TDX5 336 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 EPS8L3Q8TE67 593 aaKnown RBP13.36□□□□□ -0.27
CCM2-217ENST00000492883 ZNF285Q96NJ3 590 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 TMEM79Q9BSE2 394 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 NLNQ9BYT8 704 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 CD244Q9BZW8 370 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 AKIRIN1Q9H9L7 192 aaPredicted RBP13.36□□□□□ -0.27
CCM2-217ENST00000492883 CPSF2Q9P2I0 782 aaKnown RBP13.36□□□□□ -0.27
CCM2-217ENST00000492883 DHCR7Q9UBM7 475 aaKnown RBP13.36□□□□□ -0.27
CCM2-217ENST00000492883 NDOR1Q9UHB4 597 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 CROTQ9UKG9 612 aa13.36□□□□□ -0.27
CCM2-217ENST00000492883 A0A1W2PPM1 405 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 CLGNO14967 610 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 OR1F1O43749 312 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 CDH16O75309 829 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 PYGBP11216 843 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 MTHFD2P13995 350 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 RORAP35398 523 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 AGTR2P50052 363 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 ALDH18A1P54886 795 aaKnown RBP13.35□□□□□ -0.27
CCM2-217ENST00000492883 CXADRP78310 365 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms