RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 TMOD3Q9NYL9 352 aa3.55□□□□□ -1.84
CLK1-213ENST00000492793 ZNF112Q9UJU3 913 aa3.55□□□□□ -1.84
CLK1-213ENST00000492793 MRPS28Q9Y2Q9 187 aaKnown RBP3.55□□□□□ -1.84
CLK1-213ENST00000492793 PPP2R2CQ9Y2T4 447 aa3.55□□□□□ -1.84
CLK1-213ENST00000492793 KIAA1217Q5T5P2 1943 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 IGSF1Q8N6C5 1336 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 IGHV4-4A0A075B6R2 117 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 YDJCA8MPS7 323 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 C17orf105B2RV13 164 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 F8VVB4 439 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 F8VWA3 439 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 CCER2I3L3R5 266 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 IFIT3O14879 490 aaKnown RBP3.54□□□□□ -1.84
CLK1-213ENST00000492793 FLRT2O43155 660 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 ST8SIA3O43173 380 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 STX6O43752 255 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 SELENOFO60613 162 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 CRCPO75575 148 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 CDK2AP2O75956 126 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 C9P02748 559 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 GPIP06744 558 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 CEACAM1P13688 526 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 CASTP20810 708 aaKnown RBP3.54□□□□□ -1.84
CLK1-213ENST00000492793 FOLH1Q04609 750 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 RBM39Q14498 530 aaKnown RBP3.54□□□□□ -1.84
CLK1-213ENST00000492793 CDO1Q16878 200 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 ZRANB3Q5FWF4 1079 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 SPOUT1Q5T280 376 aaKnown RBP3.54□□□□□ -1.84
CLK1-213ENST00000492793 FAM46CQ5VWP2 391 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 TXNRD3NBQ6F5E7 133 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 BHLHA9Q7RTU4 235 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 APLFQ8IW19 511 aaPredicted RBP3.54□□□□□ -1.84
CLK1-213ENST00000492793 TUSC5Q8IXB3 177 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 UXS1Q8NBZ7 420 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 DDHD1Q8NEL9 900 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 DBF4BQ8NFT6 615 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 CTCFLQ8NI51 663 aaPredicted RBP3.54□□□□□ -1.84
CLK1-213ENST00000492793 UBLCP1Q8WVY7 318 aaPredicted RBP3.54□□□□□ -1.84
CLK1-213ENST00000492793 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 DUX3Q96PT4 197 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 BTBD9Q96Q07 612 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 UTP14AQ9BVJ6 771 aaKnown RBP3.54□□□□□ -1.84
CLK1-213ENST00000492793 NYXQ9GZU5 481 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 ACTL8Q9H568 366 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 TXLNGQ9NUQ3 528 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 COLEC10Q9Y6Z7 277 aa3.54□□□□□ -1.84
CLK1-213ENST00000492793 KIF26BQ2KJY2 2108 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 A0A087WYN8 130 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 A0A0U1RQK1 487 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 ZNF320A2RRD8 509 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 TMEM150CB9EJG8 249 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 PRSS46E5RG02 174 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 E5RGE8 158 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 PSMD14O00487 310 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 ZNF195O14628 629 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 SOCS5O75159 536 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 SIX3O95343 332 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 RAF1P04049 648 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 ATP1B1P05026 303 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 ANKRD34CP0C6C1 535 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 SLC2A2P11168 524 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 NPBWR1P48145 328 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 GMPSP49915 693 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 CLDN15P56746 228 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 IL10RBQ08334 325 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 E2F5Q15329 346 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 GPR33Q49SQ1 333 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 PDLIM3Q53GG5 364 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 FAM166AQ6J272 317 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 ARHGAP11AQ6P4F7 1023 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 OTOAQ7RTW8 1153 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 PTAR1Q7Z6K3 402 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 HOGA1Q86XE5 327 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 LACC1Q8IV20 430 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 SYCP3Q8IZU3 236 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 MARVELD2Q8N4S9 558 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 GBP7Q8N8V2 638 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 LRTM2Q8N967 370 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 ATAD1Q8NBU5 361 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 KIAA0895Q8NCT3 520 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 PIK3R3Q92569 461 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 DYRK2Q92630 601 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 LRR1Q96L50 414 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 KLHL5Q96PQ7 755 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 NDNQ99608 321 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 NKX3-1Q99801 234 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 GPATCH1Q9BRR8 931 aaKnown RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 DGCR6LQ9BY27 220 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 PITPNM3Q9BZ71 974 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 LSG1Q9H089 658 aaKnown RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 MMADHCQ9H3L0 296 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 LMAN1LQ9HAT1 526 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 ZNF71Q9NQZ8 489 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 PHPT1Q9NRX4 125 aaPredicted RBP3.53□□□□□ -1.84
CLK1-213ENST00000492793 VPS18Q9P253 973 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 SLC12A6Q9UHW9 1150 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 MAN1B1Q9UKM7 699 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 NCKAP1Q9Y2A7 1128 aa3.53□□□□□ -1.84
CLK1-213ENST00000492793 WDR37Q9Y2I8 494 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms