RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 PTPRCP08575 1304 aa3.09□□□□□ -1.91
VPS36-205ENST00000492650 DHX29Q7Z478 1369 aaKnown RBP3.09□□□□□ -1.92
VPS36-205ENST00000492650 COL2A1P02458 1487 aaPredicted RBP3.09□□□□□ -1.92
VPS36-205ENST00000492650 IGLV5-45A0A087WSX0 123 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 A0A1B0GVY2 172 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 A0A1B0GWJ7 208 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 ELOVL7A1L3X0 281 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CTAGE15A4D2H0 777 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 SDR42E2A6NKP2 422 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 YDJCA8MPS7 323 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 TO15178 435 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CYTIPO60759 359 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 MED24O75448 989 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 SLC16A8O95907 504 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 EGFP01133 1207 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 RLN1P04808 185 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 FAM86B2P0C5J1 330 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 LINGO3P0C6S8 592 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CTAGE8P0CG41 777 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 C8orf89P0DMQ9 161 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 IL7RP16871 459 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 POLR2CP19387 275 aaPredicted RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 NR1D1P20393 614 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 SFNP31947 248 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 DEKP35659 375 aaKnown RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 SSR1P43307 286 aaKnown RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 DHPSP49366 369 aaPredicted RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 ARSEP51690 589 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 UCP2P55851 309 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 ACSM1Q08AH1 577 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 SCGB2A2Q13296 93 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 GPM6BQ13491 265 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 DRAP1Q14919 205 aaPredicted RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 PPP1R7Q15435 360 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 DLG2Q15700 870 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 RARS2Q5T160 578 aaKnown RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 ZC2HC1BQ5TFG8 222 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 TOM1L2Q6ZVM7 507 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 INTS8Q75QN2 995 aaKnown RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 ARMCX2Q7L311 632 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CTAGE6Q86UF2 777 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 HAPLN4Q86UW8 402 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 ADIPOR2Q86V24 386 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 ZNF410Q86VK4 478 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 ARID3BQ8IVW6 561 aaPredicted RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 CTAGE4Q8IX94 777 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CCDC13Q8IYE1 715 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 SCYL3Q8IZE3 742 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 BATF2Q8N1L9 274 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 RASGEF1CQ8N431 466 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 FAM133AQ8N9E0 248 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 UXS1Q8NBZ7 420 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CCDC148Q8NFR7 591 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 OR52I2Q8NH67 350 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CHURC1Q8WUH1 139 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CFAP36Q96G28 342 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CNOT6LQ96LI5 555 aaKnown RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 SPATA13Q96N96 652 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 LRRC3BQ96PB8 259 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 FAM110AQ9BQ89 295 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CARD6Q9BX69 1037 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 MTMR12Q9C0I1 747 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CCSER1Q9C0I3 900 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 SPATC1LQ9H0A9 340 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 P2RY12Q9H244 342 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 FZD8Q9H461 694 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 TFB2MQ9H5Q4 396 aaKnown RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 RPAP3Q9H6T3 665 aaPredicted RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 AKIRIN1Q9H9L7 192 aaPredicted RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 TRPV5Q9NQA5 729 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 CENPMQ9NSP4 180 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 PNPLA3Q9NST1 481 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 TMOD3Q9NYL9 352 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 ANKMY1Q9P2S6 941 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 TRIM10Q9UDY6 481 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 TRMT6Q9UJA5 497 aaKnown RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 CFAP45Q9UL16 551 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 SNX7Q9UNH6 387 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 R3HDM2Q9Y2K5 976 aaKnown RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 AAR2Q9Y312 384 aaKnown RBP3.08□□□□□ -1.92
VPS36-205ENST00000492650 UTYO14607 1347 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 NPHP3Q7Z494 1330 aa3.08□□□□□ -1.92
VPS36-205ENST00000492650 A0A0A6YYC8 382 aaPredicted RBP3.07□□□□□ -1.92
VPS36-205ENST00000492650 ARPC4-TTLL3A0A0A6YYG9 625 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 XKRY2A2RUG3 117 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 C5orf51A6NDU8 294 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 CFAP73A6NFT4 308 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 HHLA1C9JL84 531 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 I3L1I5 382 aaPredicted RBP3.07□□□□□ -1.92
VPS36-205ENST00000492650 CXCL11O14625 94 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 OGG1O15527 345 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 ST8SIA3O43173 380 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 SPINT2O43291 252 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 SYNGR3O43761 229 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 GMFGO60234 142 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 NEMFO60524 1076 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 GPC4O75487 556 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 PRAMEF12O95522 483 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 AK1P00568 194 aa3.07□□□□□ -1.92
VPS36-205ENST00000492650 GH1P01241 217 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms