RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 PRR7Q8TB68 274 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 DNAJB14Q8TBM8 379 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 ASB11Q8WXH4 323 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 THOC3Q96J01 351 aaKnown RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 C5orf34Q96MH7 638 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 SERPINB12Q96P63 405 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 ACAT2Q9BWD1 397 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 DRC3Q9H069 523 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 C20orf96Q9NUD7 363 aaPredicted RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 ASF1BQ9NVP2 202 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 LUZP4Q9P127 313 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 CTSFQ9UBX1 484 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 C19orf25Q9UFG5 118 aaPredicted RBP8.34□□□□□ -1.07
NUP50-217ENST00000491860 CIDEBQ9UHD4 219 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 TAC3Q9UHF0 121 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 TEKT2Q9UIF3 430 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 C3orf18Q9UK00 162 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 PPP2R2CQ9Y2T4 447 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 DHRS7Q9Y394 339 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 MAD1L1Q9Y6D9 718 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 MAU2Q9Y6X3 613 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 PCSK5Q92824 1860 aa8.34□□□□□ -1.07
NUP50-217ENST00000491860 KCNE1BA0A087WTH5 132 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 LOC105369274A0A096LPK9 316 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 LOC102723532A0A0G2JNH3 316 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 TCRBV7S3A2A0A539 114 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 WIPF3A6NGB9 483 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 GOLGA8KD6RF30 607 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 E7ENX8 843 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 H0YGG7 62 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 H0YIG0 161 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 GOLGA8TH3BQL2 631 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 SMAPO00193 183 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 CDK2AP1O14519 115 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 SLC16A5O15375 505 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 ZSCAN12O43309 604 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 SEMA7AO75326 666 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 WFS1O76024 890 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 BMP10O95393 424 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 SLC16A8O95907 504 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 SYF2O95926 243 aaKnown RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 SERPINA7P05543 415 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 UQCRHP07919 91 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 HIST1H2AGP0C0S8 130 aaPredicted RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 PGAM1P18669 254 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 HIST1H2ADP20671 130 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 CXCR5P32302 372 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 FBN2P35556 2912 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 SLC26A3P40879 764 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 MAGEA3P43357 314 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 RIPPLY3P57055 190 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 ARF3P61204 181 aaPredicted RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 CACNA1DQ01668 2161 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 TAP2Q03519 686 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 CDC16Q13042 620 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 TSTA3Q13630 321 aaPredicted RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 FASTKQ14296 549 aaKnown RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 TRIP13Q15645 432 aaPredicted RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 EIF2S3LQ2VIR3 472 aaKnown RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 CCSMST1Q4G0I0 132 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 ATG9BQ674R7 924 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 ZNF425Q6IV72 752 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 FBXO42Q6P3S6 717 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 FAM180AQ6UWF9 173 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 SUSD1Q6UWL2 747 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 KIAA0408Q6ZU52 694 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 UBE2R2Q712K3 238 aaPredicted RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 MAMDC2Q7Z304 686 aaPredicted RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 ADCK2Q7Z695 626 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 CUZD1Q86UP6 607 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 PARP9Q8IXQ6 854 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 OR4N4Q8N0Y3 316 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 TBC1D19Q8N5T2 526 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 BCORP1Q8N888 145 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.33□□□□□ -1.08
NUP50-217ENST00000491860 CAMKVQ8NCB2 501 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 SUN3Q8TAQ9 357 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 ACTRT1Q8TDG2 376 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 ZNF480Q8WV37 535 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 METTL21AQ8WXB1 218 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 MMABQ96EY8 250 aaPredicted RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 HIST1H2AHQ96KK5 128 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 C10orf90Q96M02 699 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 CCDC138Q96M89 665 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 RUNDC3BQ96NL0 473 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 OR2A5Q96R48 311 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 PKP4Q99569 1192 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 HIST1H2AJQ99878 128 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 H2AFJQ9BTM1 129 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 TUBB6Q9BUF5 446 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 YIPF2Q9BWQ6 316 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 RNF32Q9H0A6 362 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 CCDC177Q9NQR7 707 aaPredicted RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 TMEM184CQ9NVA4 438 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 TAS2R13Q9NYV9 303 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 TRPC4Q9UBN4 977 aa8.33□□□□□ -1.08
NUP50-217ENST00000491860 TRMT6Q9UJA5 497 aaKnown RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 CORO1CQ9ULV4 474 aaPredicted RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 NOVA2Q9UNW9 492 aaKnown RBP8.33□□□□□ -1.08
NUP50-217ENST00000491860 RUVBL2Q9Y230 463 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms