RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 STMN3Q9NZ72 180 aa13.72□□□□□ -0.21
SSR4-212ENST00000491833 SPATA7Q9P0W8 599 aa13.72□□□□□ -0.21
SSR4-212ENST00000491833 RUVBL1Q9Y265 456 aaKnown RBP13.72□□□□□ -0.21
SSR4-212ENST00000491833 ZNF835Q9Y2P0 537 aa13.72□□□□□ -0.21
SSR4-212ENST00000491833 MEMO1Q9Y316 297 aa13.72□□□□□ -0.21
SSR4-212ENST00000491833 PCDHGB6Q9Y5F9 930 aa13.72□□□□□ -0.21
SSR4-212ENST00000491833 CACNA1CQ13936 2221 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 FANCGO15287 622 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 TTI1O43156 1089 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 SLCO2B1O94956 709 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 C1orf105O95561 183 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 SLC26A3P40879 764 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 CCNFP41002 786 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 PRAMEP78395 509 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 ALDH6A1Q02252 535 aaKnown RBP13.71□□□□□ -0.21
SSR4-212ENST00000491833 CDH17Q12864 832 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 SEMA3AQ14563 771 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 KRTCAP3Q53RY4 240 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 TSTD2Q5T7W7 516 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 TMEM205Q6UW68 189 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 Q6ZPB1 254 aaPredicted RBP13.71□□□□□ -0.21
SSR4-212ENST00000491833 SPPL2CQ8IUH8 684 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 KRT222Q8N1A0 295 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 CSNK1A1LQ8N752 337 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 AMER3Q8N944 861 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 FAM71DQ8N9W8 422 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 OR52K1Q8NGK4 314 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 OR6P1Q8NGX9 317 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 ADAMTS18Q8TE60 1221 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 FOPNLQ96NB1 174 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 PANX3Q96QZ0 392 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 DPH7Q9BTV6 452 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 SLC2A6Q9UGQ3 507 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 ANAPC5Q9UJX4 755 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 MKL2Q9ULH7 1088 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 TTC7AQ9ULT0 858 aaPredicted RBP13.71□□□□□ -0.21
SSR4-212ENST00000491833 NFS1Q9Y697 457 aa13.71□□□□□ -0.21
SSR4-212ENST00000491833 DCHS2Q6V1P9 2916 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 A0A1W2PPV9 198 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 KRT87PA6NCN2 255 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 H0YGG7 62 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 PRMT5O14744 637 aaPredicted RBP13.7□□□□□ -0.22
SSR4-212ENST00000491833 C8orf89P0DMQ9 161 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 ABOP16442 354 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 ARF3P61204 181 aaPredicted RBP13.7□□□□□ -0.22
SSR4-212ENST00000491833 GNG11P61952 73 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 HKDC1Q2TB90 917 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 CCSMST1Q4G0I0 132 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 MEI1Q5TIA1 1274 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 GARNL3Q5VVW2 1013 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 PTRHD1Q6GMV3 140 aaKnown RBP13.7□□□□□ -0.22
SSR4-212ENST00000491833 ZNF534Q76KX8 674 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 ZC3H7AQ8IWR0 971 aaKnown RBP13.7□□□□□ -0.22
SSR4-212ENST00000491833 REXO1L1PQ8IX06 675 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 SLC35F6Q8N357 371 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 TAB3Q8N5C8 712 aaPredicted RBP13.7□□□□□ -0.22
SSR4-212ENST00000491833 MAGEC3Q8TD91 643 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 METTL21AQ8WXB1 218 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 POM121Q96HA1 1249 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 HES6Q96HZ4 224 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 IMMP1LQ96LU5 166 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 ZNF354BQ96LW1 612 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 DRC3Q9H069 523 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 TSPAN10Q9H1Z9 355 aaPredicted RBP13.7□□□□□ -0.22
SSR4-212ENST00000491833 C19orf25Q9UFG5 118 aaPredicted RBP13.7□□□□□ -0.22
SSR4-212ENST00000491833 GNPTGQ9UJJ9 305 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 RIMKLBQ9ULI2 386 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 RUVBL2Q9Y230 463 aaKnown RBP13.7□□□□□ -0.22
SSR4-212ENST00000491833 JRKLQ9Y4A0 524 aa13.7□□□□□ -0.22
SSR4-212ENST00000491833 SETD2Q9BYW2 2564 aaPredicted RBP13.7□□□□□ -0.22
SSR4-212ENST00000491833 USP27XA6NNY8 438 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 A8MUI8 341 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 KPNA5O15131 536 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 DIAPH2O60879 1101 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 WISP2O76076 250 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 SEC24DO94855 1032 aaPredicted RBP13.69□□□□□ -0.22
SSR4-212ENST00000491833 CD1EP15812 388 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 EEF1DP29692 281 aaKnown RBP13.69□□□□□ -0.22
SSR4-212ENST00000491833 GDF10P55107 478 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 ACVR1Q04771 509 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 SYT16Q17RD7 645 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 BTBD16Q32M84 506 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 AADACL2Q6P093 401 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 MEX3BQ6ZN04 569 aaKnown RBP13.69□□□□□ -0.22
SSR4-212ENST00000491833 NCCRP1Q6ZVX7 275 aaPredicted RBP13.69□□□□□ -0.22
SSR4-212ENST00000491833 EID3Q8N140 333 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 BEST3Q8N1M1 668 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 FAM98AQ8NCA5 519 aaKnown RBP13.69□□□□□ -0.22
SSR4-212ENST00000491833 MDS2Q8NDY4 140 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 PHF10Q8WUB8 498 aaKnown RBP13.69□□□□□ -0.22
SSR4-212ENST00000491833 ALG3Q92685 438 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 RERGQ96A58 199 aaPredicted RBP13.69□□□□□ -0.22
SSR4-212ENST00000491833 PLCD4Q9BRC7 762 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 ENKD1Q9H0I2 346 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 MRPS30Q9NP92 439 aaKnown RBP13.69□□□□□ -0.22
SSR4-212ENST00000491833 KLHL1Q9NR64 748 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 CATSPERZQ9NTU4 200 aa13.69□□□□□ -0.22
SSR4-212ENST00000491833 PCNX1Q96RV3 2341 aa13.68□□□□□ -0.22
SSR4-212ENST00000491833 A0A0A6YYC8 382 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms