RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 P2RY12Q9H244 342 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 C14orf105Q9NVL8 296 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 TTC7AQ9ULT0 858 aaPredicted RBP12.52□□□□□ -0.41
USF1-206ENST00000491629 DUSP10Q9Y6W6 482 aa12.52□□□□□ -0.41
USF1-206ENST00000491629 A0A0A6YYC8 382 aaPredicted RBP12.51□□□□□ -0.41
USF1-206ENST00000491629 ASPDHA6ND91 283 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 I3L1I5 382 aaPredicted RBP12.51□□□□□ -0.41
USF1-206ENST00000491629 ERGP11308 486 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 CD96P40200 585 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 TBX2Q13207 712 aaPredicted RBP12.51□□□□□ -0.41
USF1-206ENST00000491629 TUBA3CQ13748 450 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.51□□□□□ -0.41
USF1-206ENST00000491629 RNFT1Q5M7Z0 435 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 ZNF425Q6IV72 752 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 TUBA3EQ6PEY2 450 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 C3P1Q6ZMU1 363 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 CEP97Q8IW35 865 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 MVB12AQ96EY5 273 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 SCMH1Q96GD3 660 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 FRMD6Q96NE9 622 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 ALS2CR12Q96Q35 445 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 DMRTA2Q96SC8 542 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 PLCD4Q9BRC7 762 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 TRIM51Q9BSJ1 452 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 VN1R1Q9GZP7 353 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 MKKSQ9NPJ1 570 aaPredicted RBP12.51□□□□□ -0.41
USF1-206ENST00000491629 KLHL1Q9NR64 748 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 ANKRD10Q9NXR5 420 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 MKL2Q9ULH7 1088 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 RIMKLBQ9ULI2 386 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 PCDHGB6Q9Y5F9 930 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 PCDHA13Q9Y5I0 950 aa12.51□□□□□ -0.41
USF1-206ENST00000491629 TCRBV7S2A1N4TA0A589 114 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 A8MUI8 341 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 NPIPA5E9PKD4 350 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 FAM227AF5H4B4 570 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 UQCRHP07919 91 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 ERVK-10P10266 1014 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 HOXB4P17483 251 aaPredicted RBP12.5□□□□□ -0.41
USF1-206ENST00000491629 CASP6P55212 293 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 KLF1Q13351 362 aaPredicted RBP12.5□□□□□ -0.41
USF1-206ENST00000491629 CTSL3PQ5NE16 218 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 ACER2Q5QJU3 275 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 SPINK14Q6IE38 97 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 SUSD1Q6UWL2 747 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 MEX3BQ6ZN04 569 aaKnown RBP12.5□□□□□ -0.41
USF1-206ENST00000491629 PRSS41Q7RTY9 318 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 DOLPP1Q86YN1 238 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 CSNK1A1LQ8N752 337 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 OR6P1Q8NGX9 317 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 SUN3Q8TAQ9 357 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 SLC35B2Q8TB61 432 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 AGAP11Q8TF27 550 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 MAGED4Q96JG8 741 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 GALPQ9UBC7 116 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 NPIPA1Q9UND3 350 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 CDC14AQ9UNH5 594 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 ASB1Q9Y576 335 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 HRH3Q9Y5N1 445 aa12.5□□□□□ -0.41
USF1-206ENST00000491629 ABCA2Q9BZC7 2435 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 PRMT5O14744 637 aaPredicted RBP12.49□□□□□ -0.41
USF1-206ENST00000491629 ASNA1O43681 348 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 SUN1O94901 812 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 TJP3O95049 919 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 MATN4O95460 622 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 STATHP02808 62 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 C8orf89P0DMQ9 161 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 ICAM2P13598 275 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 IGFBP2P18065 325 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 CDH17Q12864 832 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 GBX1Q14549 363 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 FASTKD1Q53R41 847 aaKnown RBP12.49□□□□□ -0.41
USF1-206ENST00000491629 KRTCAP3Q53RY4 240 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 ZNF468Q5VIY5 522 aaPredicted RBP12.49□□□□□ -0.41
USF1-206ENST00000491629 PLAG1Q6DJT9 500 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 CRLF3Q8IUI8 442 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 MARVELD2Q8N4S9 558 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 TC2NQ8N9U0 490 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 LRRC45Q96CN5 670 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 CYTH2Q99418 400 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 SPATA7Q9P0W8 599 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 TSR3Q9UJK0 312 aaKnown RBP12.49□□□□□ -0.41
USF1-206ENST00000491629 TCAF1Q9Y4C2 921 aa12.49□□□□□ -0.41
USF1-206ENST00000491629 ARHGEF33A8MVX0 844 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 TTI1O43156 1089 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 PSMD3O43242 534 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 NEURL1O76050 574 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 TPM3P06753 285 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 ADRA1DP25100 572 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 CMPK1P30085 196 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 RWDD2BP57060 319 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 ALDH6A1Q02252 535 aaKnown RBP12.48□□□□□ -0.41
USF1-206ENST00000491629 TMED2Q15363 201 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 OR1C1Q15619 314 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 BTBD16Q32M84 506 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 P3H1Q32P28 736 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 GARNL3Q5VVW2 1013 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 TTC23LQ6PF05 361 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 CPEB2Q7Z5Q1 589 aaKnown RBP12.48□□□□□ -0.41
USF1-206ENST00000491629 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms