RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 HSPA7P48741 367 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 CLLU1OSQ5K130 101 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 MLIPQ5VWP3 458 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 DOK6Q6PKX4 331 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 MDGA1Q8NFP4 955 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 TRIM63Q969Q1 353 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 SLC39A13Q96H72 371 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 KCNS3Q9BQ31 491 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 AASDHPPTQ9NRN7 309 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 ASIC5Q9NY37 505 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 CRNNQ9UBG3 495 aaPredicted RBP18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 SPASTQ9UBP0 616 aa18.77■□□□□ 0.6
SNAPC3-206ENST00000490969 SCN5AQ14524 2016 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 KRT87PA6NCN2 255 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 GOLGA8CPA6NN73 597 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 IQCF5A8MTL0 148 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 ARHGAP33O14559 1287 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 PTHP01270 115 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 BCKDHAP12694 445 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 TTPAP49638 278 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 SBSNQ6UWP8 590 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 CIR1Q86X95 450 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 RGL4Q8IZJ4 473 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 GRPEL2Q8TAA5 225 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 RNF170Q96K19 258 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 KCNC2Q96PR1 638 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 PKMYT1Q99640 499 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 TTPALQ9BTX7 342 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 GABARAPL3Q9BY60 117 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 CLPBQ9H078 707 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 NSUN3Q9H649 340 aaKnown RBP18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 HCSTQ9UBK5 93 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 ZNF490Q9ULM2 529 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 CFL2Q9Y281 166 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 GPSM3Q9Y4H4 160 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 SNX8Q9Y5X2 465 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 LAMA3Q16787 3333 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 FFAR2O15552 330 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 KIAA0513O60268 411 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 ULK1O75385 1050 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 UGT2B17O75795 530 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 SLITRK5O94991 958 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 ABCB1P08183 1280 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 STSP08842 583 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 ODC1P11926 461 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 RFX2P48378 723 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 CRISP3P54108 245 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 ATN1P54259 1190 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 TAF1AQ15573 450 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 TTLL9Q3SXZ7 439 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 INO80DQ53TQ3 878 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 OR10T2Q8NGX3 314 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 RMDN1Q96DB5 314 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 CEP295NLQ96MC4 621 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 COL21A1Q96P44 957 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 RAD9AQ99638 391 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 GPR83Q9NYM4 423 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 RPS6KA6Q9UK32 745 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 FNDC3AQ9Y2H6 1198 aaKnown RBP18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 PCDHGB2Q9Y5G2 931 aa18.76■□□□□ 0.59
SNAPC3-206ENST00000490969 HMX3A6NHT5 357 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 FAM25AB3EWG3 89 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 FAM25CB3EWG5 89 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 FAM25GB3EWG6 89 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 TNFRSF10BO14763 440 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 CRYZL1O95825 349 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 HSMCR30P0CW71 290 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 ITGA2P17301 1181 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 TIE1P35590 1138 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 GATMP50440 423 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 NUDT6P53370 316 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 ITGA1P56199 1179 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 P2RX3P56373 397 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 TBX4P57082 545 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 NEK5Q6P3R8 708 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 TRIM46Q7Z4K8 759 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 ZNF438Q7Z4V0 828 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 ADAMTSL2Q86TH1 951 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 ZSWIM9Q86XI8 627 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 FLCNQ8NFG4 579 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 ST13P5Q8NFI4 369 aaPredicted RBP18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 SUN5Q8TC36 379 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 JPH3Q8WXH2 748 aaPredicted RBP18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 HSH2DQ96JZ2 352 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 SMIM14Q96QK8 99 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 ZBED2Q9BTP6 218 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 IRF2BPLQ9H1B7 796 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 FKBPLQ9UIM3 349 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 KLK4Q9Y5K2 254 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 PATJQ8NI35 1801 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 GUCA1CO95843 209 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 C9P02748 559 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 CYP2A7P20853 494 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 MC4RP32245 332 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 GGT2P36268 569 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 HNF4AP41235 474 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 CYP4F2P78329 520 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 YIF1BQ5BJH7 314 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 Q5BKY6 102 aa18.75■□□□□ 0.59
SNAPC3-206ENST00000490969 ARMC4Q5T2S8 1044 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms