RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 KDELR1P24390 212 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 ACRV1P26436 265 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 ADH7P40394 386 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 GRB7Q14451 532 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 GXYLT1Q4G148 440 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 E4F1Q66K89 784 aaPredicted RBP12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 RNF44Q7L0R7 432 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 SERPINA9Q86WD7 417 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 SULF2Q8IWU5 870 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 SLC5A8Q8N695 610 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 POGLUT1Q8NBL1 392 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 OR2L8Q8NGY9 312 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 FAM222BQ8WU58 562 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 ERGIC2Q96RQ1 377 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 MIPEPQ99797 713 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 SYNPO2LQ9H987 977 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 RUVBL1Q9Y265 456 aaKnown RBP12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 FAM215AQ9Y5M1 114 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 PRSS21Q9Y6M0 314 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 HEATR5BQ9P2D3 2071 aa12.87□□□□□ -0.35
EXOSC3-207ENST00000490516 A0A0A6YYC8 382 aaPredicted RBP12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 SLC5A10A0PJK1 596 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 TRIM64A6NGJ6 449 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 TRIM64BA6NI03 449 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 LRRC53A6NM62 1247 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 H0YGG7 62 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 I3L1I5 382 aaPredicted RBP12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 MYO1FO00160 1098 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 FOXS1O43638 330 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 GSTM1P09488 218 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 ACVR2AP27037 513 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 TPP2P29144 1249 aaPredicted RBP12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 CSE1LP55060 971 aaKnown RBP12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 ARF3P61204 181 aaPredicted RBP12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 GSTM4Q03013 218 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 WASHC5Q12768 1159 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 CBLBQ13191 982 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 DAZAP2Q15038 168 aaPredicted RBP12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 HKDC1Q2TB90 917 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 SLC25A35Q3KQZ1 300 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 MFSD4BQ5TF39 518 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 SLC9A4Q6AI14 798 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 HMBOX1Q6NT76 420 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 ANKRD37Q7Z713 158 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 PAQR7Q86WK9 346 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 P3H2Q8IVL5 708 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 M1APQ8TC57 530 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 SLCO2A1Q92959 643 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 MVB12AQ96EY5 273 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 ZFYVE21Q9BQ24 234 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 DEFB127Q9H1M4 99 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 MMP25Q9NPA2 562 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 SCN3AQ9NY46 2000 aa12.86□□□□□ -0.35
EXOSC3-207ENST00000490516 TRBV5-4A0A0C4DH59 114 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 C5orf60A6NFR6 353 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 NDC80O14777 642 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 APOL1O14791 398 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 TACR1P25103 407 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 MC4RP32245 332 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 ARHGAP25P42331 645 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 CYB561P49447 251 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 ITGA8P53708 1063 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 SNRPNP63162 240 aaKnown RBP12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 MESDQ14696 234 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 EXT1Q16394 746 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 MINDY4Q4G0A6 757 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 SYTL3Q4VX76 610 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 RTL6Q6ICC9 239 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 FBXO42Q6P3S6 717 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 ZNF585AQ6P3V2 769 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 LRRC8BQ6P9F7 803 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 TAS2R42Q7RTR8 314 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 CFAP61Q8NHU2 1237 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 C16orf52Q8NHV5 167 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 TMEM125Q96AQ2 219 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 FCRL5Q96RD9 977 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 PLCD4Q9BRC7 762 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 BDH2Q9BUT1 245 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 SARGQ9BW04 601 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 FSD1LQ9BXM9 530 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 ATG10Q9H0Y0 220 aa12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 C19orf25Q9UFG5 118 aaPredicted RBP12.85□□□□□ -0.35
EXOSC3-207ENST00000490516 LRRD1A4D1F6 860 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 SYT5O00445 386 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 PEX1O43933 1283 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 AP2A2O94973 939 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 SKILP12757 684 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 PEX19P40855 299 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 ZNF140P52738 457 aaPredicted RBP12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 EMP3P54852 163 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 DYNLT1P63172 113 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 MPP3Q13368 585 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 DBN1Q16643 649 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 GPR33Q49SQ1 333 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 B3GNT6Q6ZMB0 384 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 RPS19BP1Q86WX3 136 aaKnown RBP12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 VRK3Q8IV63 474 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 OR2L3Q8NG85 312 aa12.84□□□□□ -0.35
EXOSC3-207ENST00000490516 TMEM158Q8WZ71 300 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms