RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TXNDC9O14530 226 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 VPS26AO75436 327 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 PIAS1O75925 651 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 CCNDBP1O95273 360 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 FDXRP22570 491 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 CMPK1P30085 196 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 PEBP1P30086 187 aaKnown RBP9.91□□□□□ -0.82
TTC28-207ENST00000490475 GCGRP47871 477 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 CLCN7P51798 805 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 TIAL1Q01085 375 aaKnown RBP eCLIP9.91□□□□□ -0.82
TTC28-207ENST00000490475 CAV1Q03135 178 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 RBBP7Q16576 425 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 MUM1Q2TAK8 710 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 TUBB8Q3ZCM7 444 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 PLEKHN1Q494U1 663 aaPredicted RBP9.91□□□□□ -0.82
TTC28-207ENST00000490475 ACSBG2Q5FVE4 666 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 B3GNTL1Q67FW5 361 aaPredicted RBP9.91□□□□□ -0.82
TTC28-207ENST00000490475 FCRL6Q6DN72 434 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 Q6ZS92 163 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 PPP1R32Q7Z5V6 425 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 CCDC25Q86WR0 208 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 CNTN4Q8IWV2 1026 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 PALM2Q8IXS6 379 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 CEP112Q8N8E3 955 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 PRR7Q8TB68 274 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 SNRNP40Q96DI7 357 aaKnown RBP9.91□□□□□ -0.82
TTC28-207ENST00000490475 WDR77Q9BQA1 342 aaPredicted RBP9.91□□□□□ -0.82
TTC28-207ENST00000490475 MENTQ9BUN1 341 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 LHPPQ9H008 270 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 MOCS1Q9NZB8 636 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 ZNF282Q9UDV7 671 aaPredicted RBP9.91□□□□□ -0.82
TTC28-207ENST00000490475 PLAGL1Q9UM63 463 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 RUVBL2Q9Y230 463 aaKnown RBP9.91□□□□□ -0.82
TTC28-207ENST00000490475 SLC5A6Q9Y289 635 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 NFS1Q9Y697 457 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 UNC79Q9P2D8 2635 aa9.91□□□□□ -0.82
TTC28-207ENST00000490475 ANKUB1A6NFN9 424 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 CYSRT1A8MQ03 144 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 E5RI56 91 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 EIF3HO15372 352 aaKnown RBP eCLIP9.9□□□□□ -0.82
TTC28-207ENST00000490475 C1orf105O95561 183 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 CATP04040 527 aaKnown RBP9.9□□□□□ -0.82
TTC28-207ENST00000490475 UMODP07911 640 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 MYBL2P10244 700 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 SSTR1P30872 391 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 GRIA3P42263 894 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 PGGT1BP53609 377 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 PER3P56645 1201 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 GPX6P59796 221 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 RELAQ04206 551 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 MGAT5Q09328 741 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 CUL1Q13616 776 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 RAPSNQ13702 412 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 FRG1Q14331 258 aaKnown RBP9.9□□□□□ -0.82
TTC28-207ENST00000490475 NKG7Q16617 165 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 ERCC6LQ2NKX8 1250 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 TTLL9Q3SXZ7 439 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 CCSMST1Q4G0I0 132 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 FAM69BQ5VUD6 431 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 IGFL2Q6UWQ7 119 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 C3orf62Q6ZUJ4 267 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 ZNF771Q7L3S4 317 aaPredicted RBP9.9□□□□□ -0.82
TTC28-207ENST00000490475 C2orf73Q8N5S3 287 aaPredicted RBP9.9□□□□□ -0.82
TTC28-207ENST00000490475 OR2L3Q8NG85 312 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 GIMAP7Q8NHV1 300 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 GABPB2Q8TAK5 448 aaPredicted RBP9.9□□□□□ -0.82
TTC28-207ENST00000490475 IFT81Q8WYA0 676 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 INPP5DQ92835 1189 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 C5orf34Q96MH7 638 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 LMF1Q96S06 567 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 NDNQ99608 321 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 GPR21Q99679 349 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 ZFYVE21Q9BQ24 234 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 AARSD1Q9BTE6 412 aaKnown RBP9.9□□□□□ -0.82
TTC28-207ENST00000490475 CCDC68Q9H2F9 335 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 ZNF304Q9HCX3 659 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 SMYD2Q9NRG4 433 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 ZDHHC18Q9NUE0 388 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 C14orf105Q9NVL8 296 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 KLHL42Q9P2K6 505 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 FBXL4Q9UKA2 621 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 DHRS7Q9Y394 339 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 PSAT1Q9Y617 370 aa9.9□□□□□ -0.82
TTC28-207ENST00000490475 MDC1Q14676 2089 aaKnown RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 HYKKA2RU49 373 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 KRT87PA6NCN2 255 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 VSTM2BA6NLU5 285 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 CXorf49A8MYA2 514 aaPredicted RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 MAP2K7O14733 419 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 HCRTR1O43613 425 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 PRICKLE3O43900 615 aaPredicted RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 MATN4O95460 622 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 CBX6O95503 412 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 HPP00738 406 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 CXCR2P25025 360 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 MCM3P25205 808 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 MAGEA4P43358 317 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 TSFMP43897 325 aaKnown RBP9.89□□□□□ -0.83
TTC28-207ENST00000490475 GLRBP48167 497 aa9.89□□□□□ -0.83
TTC28-207ENST00000490475 CDKN2DP55273 166 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms