RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SOX17Q9H6I2 414 aaPredicted RBP16.65■□□□□ 0.26
SEC13-218ENST00000490283 ATP13A2Q9NQ11 1180 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 SEMA3GQ9NS98 782 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 TMEM184CQ9NVA4 438 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 CTSFQ9UBX1 484 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 ZNF282Q9UDV7 671 aaPredicted RBP16.65■□□□□ 0.26
SEC13-218ENST00000490283 ADAMTS6Q9UKP5 1117 aa16.65■□□□□ 0.26
SEC13-218ENST00000490283 BOD1L1Q8NFC6 3051 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 H7BY64 318 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 HAT1O14929 419 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 IPO13O94829 963 aaKnown RBP16.64■□□□□ 0.25
SEC13-218ENST00000490283 SAT1P21673 171 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 FDXRP22570 491 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 GRK3P35626 688 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 AP1S2P56377 157 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 TIAL1Q01085 375 aaKnown RBP eCLIP16.64■□□□□ 0.25
SEC13-218ENST00000490283 RAPSNQ13702 412 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 COLEC12Q5KU26 742 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 COX15Q7KZN9 410 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 STRA8Q7Z7C7 330 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 SLC26A11Q86WA9 606 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 SPNS2Q8IVW8 549 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 LRRC56Q8IYG6 542 aaPredicted RBP16.64■□□□□ 0.25
SEC13-218ENST00000490283 GALNT16Q8N428 558 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 EFCAB3Q8N7B9 438 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 PYROXD1Q8WU10 500 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 ATL1Q8WXF7 558 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 TM9SF4Q92544 642 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 MIEF2Q96C03 454 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 VPS39Q96JC1 886 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 C10orf90Q96M02 699 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 PRAP1Q96NZ9 151 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 SPSB2Q99619 263 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 WDR83Q9BRX9 315 aaKnown RBP16.64■□□□□ 0.25
SEC13-218ENST00000490283 ERP44Q9BS26 406 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 CRB3Q9BUF7 120 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 NUDT9Q9BW91 350 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 YIPF2Q9BWQ6 316 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 DPH5Q9H2P9 285 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 PLAC1Q9HBJ0 212 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 CUEDC1Q9NWM3 386 aaPredicted RBP16.64■□□□□ 0.25
SEC13-218ENST00000490283 ARL15Q9NXU5 204 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 WHRNQ9P202 907 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 C5AR2Q9P296 337 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 TXNDC16Q9P2K2 825 aa16.64■□□□□ 0.25
SEC13-218ENST00000490283 RUVBL1Q9Y265 456 aaKnown RBP16.64■□□□□ 0.25
SEC13-218ENST00000490283 UTP11Q9Y3A2 253 aaKnown RBP16.64■□□□□ 0.25
SEC13-218ENST00000490283 TTLL8A6PVC2 850 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 E7ESA3 106 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 FANCGO15287 622 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 ENO2P09104 434 aaPredicted RBP16.63■□□□□ 0.25
SEC13-218ENST00000490283 SLC12A2P55011 1212 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 FOXL2P58012 376 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 RPS15AP62244 130 aaKnown RBP16.63■□□□□ 0.25
SEC13-218ENST00000490283 ETF1P62495 437 aaKnown RBP16.63■□□□□ 0.25
SEC13-218ENST00000490283 FOXK1P85037 733 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 AIMP2Q13155 320 aaKnown RBP16.63■□□□□ 0.25
SEC13-218ENST00000490283 NAE1Q13564 534 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 MYBPC3Q14896 1274 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 CAPN13Q6MZZ7 669 aaPredicted RBP16.63■□□□□ 0.25
SEC13-218ENST00000490283 SHISA6Q6ZSJ9 500 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 ATCAYQ86WG3 371 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 CDKL2Q92772 493 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 OR2A5Q96R48 311 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 SMAD5Q99717 465 aaKnown RBP16.63■□□□□ 0.25
SEC13-218ENST00000490283 HAUS8Q9BT25 410 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 DRC3Q9H069 523 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 ATG10Q9H0Y0 220 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 FBXL4Q9UKA2 621 aa16.63■□□□□ 0.25
SEC13-218ENST00000490283 EIF3HO15372 352 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEC13-218ENST00000490283 ZGLP1P0C6A0 271 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 ITGA3P26006 1051 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 AVPR1BP47901 424 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 MRPS25P82663 173 aaKnown RBP16.62■□□□□ 0.25
SEC13-218ENST00000490283 C2orf54Q08AI8 447 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 DSG2Q14126 1118 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 FASTKD3Q14CZ7 662 aaKnown RBP16.62■□□□□ 0.25
SEC13-218ENST00000490283 HKDC1Q2TB90 917 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 TUBB8Q3ZCM7 444 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 DUPD1Q68J44 220 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 LCTLQ6UWM7 567 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 SYT10Q6XYQ8 523 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 MBOAT1Q6ZNC8 495 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 PLD3Q8IV08 490 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 NKAPQ8N5F7 415 aaKnown RBP16.62■□□□□ 0.25
SEC13-218ENST00000490283 TBC1D19Q8N5T2 526 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 STT3BQ8TCJ2 826 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 THAP11Q96EK4 314 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 MMABQ96EY8 250 aaPredicted RBP16.62■□□□□ 0.25
SEC13-218ENST00000490283 OLFM1Q99784 485 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 RAB17Q9H0T7 212 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 SAYSD1Q9NPB0 183 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 C14orf105Q9NVL8 296 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 TRPC4Q9UBN4 977 aa16.62■□□□□ 0.25
SEC13-218ENST00000490283 FAM95CA0A1B0GW59 222 aa16.61■□□□□ 0.25
SEC13-218ENST00000490283 VSTM2BA6NLU5 285 aa16.61■□□□□ 0.25
SEC13-218ENST00000490283 RAD51CO43502 376 aa16.61■□□□□ 0.25
SEC13-218ENST00000490283 TSPAN12O95859 305 aa16.61■□□□□ 0.25
SEC13-218ENST00000490283 MLLT10P55197 1068 aa16.61■□□□□ 0.25
SEC13-218ENST00000490283 CAV1Q03135 178 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms