RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 CAMK2DQ13557 499 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 TMEM132DQ14C87 1099 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 LACTB2Q53H82 288 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-206ENST00000489868 WLSQ5T9L3 541 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 OR8H2Q8N162 312 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 LRTM2Q8N967 370 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 MRPS27Q92552 414 aaKnown RBP4.35□□□□□ -1.71
CCDC39-206ENST00000489868 OMA1Q96E52 524 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 C2orf48Q96LS8 159 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 KLHL5Q96PQ7 755 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 MTMR12Q9C0I1 747 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 WWTR1Q9GZV5 400 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 FAM49AQ9H0Q0 323 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-206ENST00000489868 CLIC5Q9NZA1 410 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 THEGQ9P2T0 379 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 TTLL3Q9Y4R7 772 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 CSNK1G3Q9Y6M4 447 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 ARID2Q68CP9 1835 aa4.35□□□□□ -1.71
CCDC39-206ENST00000489868 TRBV4-1A0A0J9YWV2 114 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 MTMR11A4FU01 709 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 PI4K2BG5E9Z4 385 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 IGHEP01854 428 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 SERPING1P05155 500 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 TCF4P15884 667 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 PRKACGP22612 351 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 EEF1B2P24534 225 aaKnown RBP4.34□□□□□ -1.71
CCDC39-206ENST00000489868 DLK1P80370 383 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 NUCB1Q02818 461 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 MZT1Q08AG7 82 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 TRA2AQ13595 282 aaKnown RBP eCLIP4.34□□□□□ -1.71
CCDC39-206ENST00000489868 GLIPR1L2Q4G1C9 344 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 C2CD6Q53TS8 623 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 TRIM65Q6PJ69 517 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 METTL7BQ6UX53 244 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 NOA1Q8NC60 698 aaKnown RBP4.34□□□□□ -1.71
CCDC39-206ENST00000489868 CAMKVQ8NCB2 501 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 CCDC191Q8NCU4 936 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 GTF3AQ92664 365 aaKnown RBP4.34□□□□□ -1.71
CCDC39-206ENST00000489868 EXT2Q93063 718 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 VPS33AQ96AX1 596 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 RMDN1Q96DB5 314 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 TRIM51Q9BSJ1 452 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 NAA11Q9BSU3 229 aaPredicted RBP4.34□□□□□ -1.71
CCDC39-206ENST00000489868 PANK2Q9BZ23 570 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 TXNDC16Q9P2K2 825 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 LIPGQ9Y5X9 500 aa4.34□□□□□ -1.71
CCDC39-206ENST00000489868 PLOD3O60568 738 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 RPS6KA5O75582 802 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 OR3A2P47893 321 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 HUNKP57058 714 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 DSCR10P59022 87 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 CYCSP99999 105 aaKnown RBP4.33□□□□□ -1.72
CCDC39-206ENST00000489868 MYL7Q01449 175 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 CDH18Q13634 790 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 TRIM29Q14134 588 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 LY6DQ14210 128 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 COG2Q14746 738 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 PTGISQ16647 500 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 LBHQ53QV2 105 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-206ENST00000489868 CES4AQ5XG92 561 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 LYSMD4Q5XG99 296 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 OR4C11Q6IEV9 310 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 KRT80Q6KB66 452 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 ZNF343Q6P1L6 599 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 ANKRD33Q7Z3H0 272 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 FAM219AQ8IW50 185 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 MFN1Q8IWA4 741 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 Q8NBF4 154 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 AQP11Q8NBQ7 271 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 Q8NFD4 153 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 PRICKLE1Q96MT3 831 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-206ENST00000489868 SERINC2Q96SA4 455 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 NDNQ99608 321 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 NUDT4Q9NZJ9 180 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 CCL27Q9Y4X3 112 aa4.33□□□□□ -1.72
CCDC39-206ENST00000489868 GLTPD2A6NH11 291 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 KPNA7A9QM74 516 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 H0YAE9 185 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 KRT33AO76009 404 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 HLA-FP30511 346 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 DUTP33316 252 aaKnown RBP4.32□□□□□ -1.72
CCDC39-206ENST00000489868 PTPN14Q15678 1187 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 HYAL4Q2M3T9 481 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 TAF1BQ53T94 588 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-206ENST00000489868 PAQR6Q6TCH4 344 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 PPP1R21Q6ZMI0 780 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 KIF6Q6ZMV9 814 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 CNRIP1Q96F85 164 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-206ENST00000489868 PYGO2Q9BRQ0 406 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 KATNB1Q9BVA0 655 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 EGLN3Q9H6Z9 239 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 RAVER2Q9HCJ3 691 aaKnown RBP4.32□□□□□ -1.72
CCDC39-206ENST00000489868 PHPT1Q9NRX4 125 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-206ENST00000489868 POLLQ9UGP5 575 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 KLK13Q9UKR3 277 aa4.32□□□□□ -1.72
CCDC39-206ENST00000489868 A0A1B0GVY2 172 aa4.31□□□□□ -1.72
CCDC39-206ENST00000489868 IDH3BO43837 385 aa4.31□□□□□ -1.72
CCDC39-206ENST00000489868 TRIM49P0CI25 452 aa4.31□□□□□ -1.72
CCDC39-206ENST00000489868 TRIM49CP0CI26 452 aa4.31□□□□□ -1.72
CCDC39-206ENST00000489868 F3P13726 295 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms