RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 ATG9BQ674R7 924 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 LETMD1Q6P1Q0 360 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 RGS9BPQ6ZS82 235 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 RNF44Q7L0R7 432 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 DCBLD1Q8N8Z6 715 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 L3MBTL4Q8NA19 623 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 TRPC4APQ8TEL6 797 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 CKAP2Q8WWK9 683 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 KLHL6Q8WZ60 621 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 PRR11Q96HE9 360 aaPredicted RBP10.47□□□□□ -0.73
TFF3-203ENST00000489676 CNDP1Q96KN2 507 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 CCDC74BQ96LY2 380 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 SORT1Q99523 831 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 PAIP2Q9BPZ3 127 aaKnown RBP10.47□□□□□ -0.73
TFF3-203ENST00000489676 CAPS2Q9BXY5 557 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 C20orf27Q9GZN8 174 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 ZNF768Q9H5H4 540 aaKnown RBP10.47□□□□□ -0.73
TFF3-203ENST00000489676 DLL3Q9NYJ7 618 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 HAO1Q9UJM8 370 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 BTRCQ9Y297 605 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 STK38LQ9Y2H1 464 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 TPRP12270 2363 aaKnown RBP10.47□□□□□ -0.73
TFF3-203ENST00000489676 WDFY3Q8IZQ1 3526 aa10.47□□□□□ -0.73
TFF3-203ENST00000489676 MDC1Q14676 2089 aaKnown RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 SLC9B1P1A6NJY1 282 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 TMEM114B3SHH9 223 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 H7BY64 318 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 HAT1O14929 419 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 ITM2AO43736 263 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 PRAMEF10O60809 474 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 LYPLA1O75608 230 aaPredicted RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 KCNK5O95279 499 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 ZBTB11O95625 1053 aaPredicted RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 ESRRBO95718 433 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 OTCP00480 354 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 C1GALT1C1LP0DN25 315 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 CDK4P11802 303 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 EZRP15311 586 aaKnown RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 HRH2P25021 359 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 MPSTP25325 297 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 VARSP26640 1264 aaKnown RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 CCR8P51685 355 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 CCNG1P51959 295 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 PKNOX1P55347 436 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 CLDN6P56747 220 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 ERVPABLB-1P60509 514 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 SH3BP2P78314 561 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 SIM1P81133 766 aaPredicted RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 OCRLQ01968 901 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 IRF8Q02556 426 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 TRA2AQ13595 282 aaKnown RBP eCLIP10.46□□□□□ -0.73
TFF3-203ENST00000489676 SLBPQ14493 270 aaKnown RBP eCLIP10.46□□□□□ -0.73
TFF3-203ENST00000489676 PUM1Q14671 1186 aaKnown RBP eCLIP10.46□□□□□ -0.73
TFF3-203ENST00000489676 NAA25Q14CX7 972 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 XKR6Q5GH73 641 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 ARL13AQ5H913 290 aaPredicted RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 CFAP157Q5JU67 520 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 CACHD1Q5VU97 1274 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 GRHL2Q6ISB3 625 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 FIGLAQ6QHK4 219 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 DHRS13Q6UX07 377 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 RBM44Q6ZP01 1051 aaKnown RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 SYVN1Q86TM6 617 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 KMT5CQ86Y97 462 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 D2HGDHQ8N465 521 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 ZNF740Q8NDX6 193 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 OR4F6Q8NGB9 312 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 PPP4R1Q8TF05 950 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 SREK1Q8WXA9 508 aaKnown RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 ZNF75CPQ92670 426 aaPredicted RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 GRAMD1AQ96CP6 724 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 PTCD3Q96EY7 689 aaKnown RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 CNTNAP3BQ96NU0 1288 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 PRAP1Q96NZ9 151 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 CDK15Q96Q40 435 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 RTKNQ9BST9 563 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 EFCAB11Q9BUY7 163 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 CNTNAP3Q9BZ76 1288 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 ZMYND15Q9H091 742 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 KLHL25Q9H0H3 589 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 CCDC134Q9H6E4 229 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 SYNDIG1Q9H7V2 258 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 ZNF395Q9H8N7 513 aaPredicted RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 FAM60AQ9NP50 221 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 TMEM184CQ9NVA4 438 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 GEMIN8Q9NWZ8 242 aaKnown RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 SIDT1Q9NXL6 827 aaKnown RBP10.46□□□□□ -0.73
TFF3-203ENST00000489676 KLHL3Q9UH77 587 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 TRPS1Q9UHF7 1281 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 PILRAQ9UKJ1 303 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 SNX7Q9UNH6 387 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 RNF11Q9Y3C5 154 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 ANGPTL3Q9Y5C1 460 aa10.46□□□□□ -0.73
TFF3-203ENST00000489676 EPG5Q9HCE0 2579 aa10.45□□□□□ -0.74
TFF3-203ENST00000489676 SPTBN2O15020 2390 aa10.45□□□□□ -0.74
TFF3-203ENST00000489676 TRBC2A0A5B9 178 aa10.45□□□□□ -0.74
TFF3-203ENST00000489676 CLGNO14967 610 aa10.45□□□□□ -0.74
TFF3-203ENST00000489676 HCRTR1O43613 425 aa10.45□□□□□ -0.74
TFF3-203ENST00000489676 RASSF9O75901 435 aa10.45□□□□□ -0.74
TFF3-203ENST00000489676 OR4F21O95013 312 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms