RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CRLS1Q9UJA2 301 aa14.11□□□□□ -0.15
UFD1-209ENST00000489406 CFAP99D6REC4 459 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 BCKDKO14874 412 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 NRP2O60462 931 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 AP2A1O95782 977 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 ANXA5P08758 320 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 PKLRP30613 574 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 BRD3Q15059 726 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 SIRPB2Q5JXA9 342 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 C1orf185Q5T7R7 199 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 RIPPLY2Q5TAB7 128 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 ELOA2Q8IYF1 753 aaPredicted RBP14.1□□□□□ -0.15
UFD1-209ENST00000489406 ZUFSPQ96AP4 578 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 RNF25Q96BH1 459 aaPredicted RBP14.1□□□□□ -0.15
UFD1-209ENST00000489406 COPS8Q99627 209 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 AMBRA1Q9C0C7 1298 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 VPS37BQ9H9H4 285 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 ALKBH4Q9NXW9 302 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 HACD3Q9P035 362 aa14.1□□□□□ -0.15
UFD1-209ENST00000489406 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.09□□□□□ -0.159e-11■■■□□ 15.2
UFD1-209ENST00000489406 A0A087X1B8 175 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 OR2W5A6NFC9 320 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 FAM47E-STBD1D6RA91 191 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 SLC16A5O15375 505 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 KDM1AO60341 852 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 S1PR4O95977 384 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 SRSF2Q01130 221 aaKnown RBP14.09□□□□□ -0.15
UFD1-209ENST00000489406 SLC14A2Q15849 920 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 FBXL19-AS1Q494R0 122 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 MINDY4Q4G0A6 757 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 ANKRD37Q7Z713 158 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 KIF18BQ86Y91 864 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 KIAA1191Q96A73 305 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 MVB12AQ96EY5 273 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 IL17FQ96PD4 163 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 CCL19Q99731 98 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 TRIM45Q9H8W5 580 aaPredicted RBP14.09□□□□□ -0.15
UFD1-209ENST00000489406 FKBPLQ9UIM3 349 aa14.09□□□□□ -0.15
UFD1-209ENST00000489406 FOXD3Q9UJU5 478 aaPredicted RBP14.09□□□□□ -0.15
UFD1-209ENST00000489406 A0A0A6YYC8 382 aaPredicted RBP14.08□□□□□ -0.16
UFD1-209ENST00000489406 SOWAHDA6NJG2 315 aa14.08□□□□□ -0.16
UFD1-209ENST00000489406 TARM1B6A8C7 271 aa14.08□□□□□ -0.16
UFD1-209ENST00000489406 I3L1I5 382 aaPredicted RBP14.08□□□□□ -0.16
UFD1-209ENST00000489406 DVL2O14641 736 aa14.08□□□□□ -0.16
UFD1-209ENST00000489406 TP53P04637 393 aaPredicted RBP14.08□□□□□ -0.16
UFD1-209ENST00000489406 CD9P21926 228 aa14.08□□□□□ -0.16
UFD1-209ENST00000489406 HLCSP50747 726 aa14.08□□□□□ -0.16
UFD1-209ENST00000489406 PPIAP62937 165 aaKnown RBP14.08□□□□□ -0.16
UFD1-209ENST00000489406 PPIDQ08752 370 aaKnown RBP14.08□□□□□ -0.16
UFD1-209ENST00000489406 DPYSL3Q14195 570 aa14.08□□□□□ -0.16
UFD1-209ENST00000489406 PRTGQ2VWP7 1150 aa14.08□□□□□ -0.16
UFD1-209ENST00000489406 PAPD4Q6PIY7 484 aaKnown RBP14.08□□□□□ -0.16
UFD1-209ENST00000489406 CNPPD1Q9BV87 410 aa14.08□□□□□ -0.16
UFD1-209ENST00000489406 MTRF1LQ9UGC7 380 aaKnown RBP14.08□□□□□ -0.16
UFD1-209ENST00000489406 VPS9D1Q9Y2B5 631 aa14.08□□□□□ -0.16
UFD1-209ENST00000489406 LIPGQ9Y5X9 500 aa14.08□□□□□ -0.16
UFD1-209ENST00000489406 ABCA1O95477 2261 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 LOC285095A0A1B0GVY8 99 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 OR14I1A6ND48 311 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 HSPB2A8KAH6 182 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 FAM166BA8MTA8 275 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 CDK2AP1O14519 115 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 WDR1O75083 606 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 FAM157CP0CG43 387 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 NR1H2P55055 460 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 WNT3AP56704 352 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 SLC25A11Q02978 314 aaKnown RBP14.07□□□□□ -0.16
UFD1-209ENST00000489406 HSPB2Q16082 182 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 SHISA5Q8N114 240 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 KIF2BQ8N4N8 673 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 CLDN19Q8N6F1 224 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 OR4K2Q8NGD2 314 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 PPP1R14CQ8TAE6 165 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 FAM71BQ8TC56 605 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 HEXDCQ8WVB3 486 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 GLOD4Q9HC38 313 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 MYO1AQ9UBC5 1043 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 ACAD8Q9UKU7 415 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 RUVBL1Q9Y265 456 aaKnown RBP14.07□□□□□ -0.16
UFD1-209ENST00000489406 NPFFR2Q9Y5X5 522 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 ARL5AQ9Y689 179 aa14.07□□□□□ -0.16
UFD1-209ENST00000489406 AGAP14A8MT82 685 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 H0YGG7 62 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 QSOX1O00391 747 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 FOXS1O43638 330 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 TLX2O43763 284 aaPredicted RBP14.06□□□□□ -0.16
UFD1-209ENST00000489406 EMP3P54852 163 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 ARF3P61204 181 aaPredicted RBP14.06□□□□□ -0.16
UFD1-209ENST00000489406 XIAPP98170 497 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 ACTN3Q08043 901 aaPredicted RBP14.06□□□□□ -0.16
UFD1-209ENST00000489406 TNK1Q13470 666 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 HKDC1Q2TB90 917 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 SFT2D3Q587I9 215 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 LRRC8BQ6P9F7 803 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 BHLHB9Q6PI77 547 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 RNF44Q7L0R7 432 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 NAXEQ8NCW5 288 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 ULK4Q96C45 1275 aa14.06□□□□□ -0.16
UFD1-209ENST00000489406 LIN7AO14910 233 aaPredicted RBP14.05□□□□□ -0.16
UFD1-209ENST00000489406 TRHRP34981 398 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms