RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 EZH1Q92800 747 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-207ENST00000489357 ESAMQ96AP7 390 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 VPS33AQ96AX1 596 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 AP2M1Q96CW1 435 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 CXorf40BQ96DE9 158 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 TEX37Q96LM6 180 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 NSMCE2Q96MF7 247 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 FRG2BQ96QU4 278 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 SLC39A3Q9BRY0 314 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 HAUS8Q9BT25 410 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 C1orf50Q9BV19 199 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 SPATA9Q9BWV2 254 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 UGT2B28Q9BY64 529 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 MRPS26Q9BYN8 205 aaKnown RBP8.2□□□□□ -1.1
VTI1A-207ENST00000489357 DPEP2Q9H4A9 486 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 EHD1Q9H4M9 534 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 MAGIXQ9H6Y5 334 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 TBC1D17Q9HA65 648 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 ITM2CQ9NQX7 267 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 SIRT5Q9NXA8 310 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 DEC1Q9P2X7 70 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 GIMAP2Q9UG22 337 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 ZNF639Q9UID6 485 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 PPT2Q9UMR5 302 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 MRPS17Q9Y2R5 130 aaKnown RBP8.2□□□□□ -1.1
VTI1A-207ENST00000489357 RNF11Q9Y3C5 154 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 POLR3HQ9Y535 204 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-207ENST00000489357 PIAS3Q9Y6X2 628 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 PIKFYVEQ9Y2I7 2098 aa8.2□□□□□ -1.1
VTI1A-207ENST00000489357 RIF1Q5UIP0 2472 aaKnown RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 TRBV5-3A0A0A0MS03 114 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 TTC34A8MYJ7 566 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 FAM220BPB1ANY3 271 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 C1QTNF3-AMACRE9PGA6 284 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 TXNDC9O14530 226 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 CLGNO14967 610 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 AREL1O15033 823 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 KHNYNO15037 678 aaKnown RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 DEAF1O75398 565 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 PRSS23O95084 383 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 RASAL1O95294 804 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 LINGO3P0C6S8 592 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 FAM157BP0CG42 384 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 RAP2AP10114 183 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 BCKDHAP12694 445 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 EPORP19235 508 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 GGT1P19440 569 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 PPIBP23284 216 aaKnown RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 TEAD1P28347 426 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 RPL3P39023 403 aaKnown RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 GDF5P43026 501 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 ASMTP46597 345 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 RPL5P46777 297 aaKnown RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 SOX9P48436 509 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 TRPC1P48995 793 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 GALK1P51570 392 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 POLE2P56282 527 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 NME5P56597 212 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 TNP2Q05952 138 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 TMEM115Q12893 351 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 MTAPQ13126 283 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 RPA4Q13156 261 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 CAPRIN1Q14444 709 aaKnown RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 CYP51A1Q16850 503 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 TMEM52BQ4KMG9 183 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 ZNF658BQ4V348 819 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 FAM98BQ52LJ0 330 aaKnown RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 FBXO48Q5FWF7 155 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 FAM46CQ5VWP2 391 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 FBXL19Q6PCT2 694 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 BORAQ6PGQ7 559 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 UNC5DQ6UXZ4 953 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 CYP2R1Q6VVX0 501 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 LPCAT2Q7L5N7 544 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 CAMKMTQ7Z624 323 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 SPRED1Q7Z699 444 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 CARM1Q86X55 608 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 SPPL2CQ8IUH8 684 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 CHERPQ8IWX8 916 aaKnown RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 EID3Q8N140 333 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 TMEM132CQ8N3T6 1108 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 SYNPOQ8N3V7 929 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 LIX1Q8N485 282 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 CPA6Q8N4T0 437 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 BEND7Q8N7W2 519 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 SNX31Q8N9S9 440 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 PJA1Q8NG27 643 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 OR56A3Q8NH54 315 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 DNAJB14Q8TBM8 379 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 HM13Q8TCT9 377 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 SKA2Q8WVK7 121 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 SELENOMQ8WWX9 145 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 LRTOMTQ8WZ04 291 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 FAM3CQ92520 227 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 WDR34Q96EX3 536 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 ABHD17AQ96GS6 310 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 ITCHQ96J02 903 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 P2RY13Q9BPV8 354 aa8.19□□□□□ -1.1
VTI1A-207ENST00000489357 RIOK2Q9BVS4 552 aaKnown RBP8.19□□□□□ -1.1
VTI1A-207ENST00000489357 HDAC8Q9BY41 377 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms