RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 B4GALT7Q9UBV7 327 aa2.58□□□□□ -2
CBWD1-216ENST00000489272 BAIAP2L1Q9UHR4 511 aa2.58□□□□□ -2
CBWD1-216ENST00000489272 POMT2Q9UKY4 750 aa2.58□□□□□ -2
CBWD1-216ENST00000489272 ZNF215Q9UL58 517 aaPredicted RBP2.58□□□□□ -2
CBWD1-216ENST00000489272 IGSF1Q8N6C5 1336 aa2.58□□□□□ -2
CBWD1-216ENST00000489272 COL4A4P53420 1690 aaPredicted RBP2.57□□□□□ -2
CBWD1-216ENST00000489272 A0A087WWV3 80 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 AGAP14A8MT82 685 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 SLC1A7O00341 560 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 TRAFD1O14545 582 aaPredicted RBP2.57□□□□□ -2
CBWD1-216ENST00000489272 ZNF354AO60765 605 aaPredicted RBP2.57□□□□□ -2
CBWD1-216ENST00000489272 MPZP25189 248 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 DCDC1P59894 354 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 ZNF146Q15072 292 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 GORABQ5T7V8 394 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 RNLSQ5VYX0 342 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 OR4A47Q6IF82 309 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 SZRD1Q7Z422 152 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 EXOC8Q8IYI6 725 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 C17orf53Q8N3J3 647 aaPredicted RBP2.57□□□□□ -2
CBWD1-216ENST00000489272 KLHL30-AS1Q8NEE0 82 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 OR4D10Q8NGI6 311 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 OR10S1Q8NGN2 331 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 ATL1Q8WXF7 558 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 ZNF622Q969S3 477 aaKnown RBP eCLIP2.57□□□□□ -2
CBWD1-216ENST00000489272 NXNL1Q96CM4 212 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 UBAC1Q9BSL1 405 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 TEX12Q9BXU0 123 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 Q9H8V8 135 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 MYNNQ9NPC7 610 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 NLGN3Q9NZ94 848 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 IL17BQ9UHF5 180 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 PRDM4Q9UKN5 801 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 WDR83OSQ9Y284 106 aa2.57□□□□□ -2
CBWD1-216ENST00000489272 ZNF256Q9Y2P7 627 aaPredicted RBP2.57□□□□□ -2
CBWD1-216ENST00000489272 CCDC189A1A4V9 331 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 ZBED4O75132 1171 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 BAIAP3O94812 1187 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 RAB40ALP0C0E4 278 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 PCP11498 1178 aaKnown RBP2.56□□□□□ -2
CBWD1-216ENST00000489272 MYOGP15173 224 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 SAT1P21673 171 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 AADACP22760 399 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 LYZP61626 148 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 FKBP3Q00688 224 aaKnown RBP2.56□□□□□ -2
CBWD1-216ENST00000489272 CREB5Q02930 508 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 VEZF1Q14119 521 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 SNAPC1Q16533 368 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 PRR30Q53SZ7 412 aaPredicted RBP2.56□□□□□ -2
CBWD1-216ENST00000489272 OLFML2AQ68BL7 652 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 FAM180BQ6P0A1 224 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 RAPH1Q70E73 1250 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 CATSPER3Q86XQ3 398 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 RPAP2Q8IXW5 612 aaPredicted RBP2.56□□□□□ -2
CBWD1-216ENST00000489272 MINDY1Q8N5J2 469 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 NOA1Q8NC60 698 aaKnown RBP2.56□□□□□ -2
CBWD1-216ENST00000489272 OR52B6Q8NGF0 335 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 METTL21AQ8WXB1 218 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 PIK3R3Q92569 461 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 NSMAFQ92636 917 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 SERAC1Q96JX3 654 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 SLITRK2Q9H156 845 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 ANAPC11Q9NYG5 84 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 NYAP2Q9P242 653 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.56□□□□□ -2
CBWD1-216ENST00000489272 ELF5Q9UKW6 265 aaPredicted RBP2.56□□□□□ -2
CBWD1-216ENST00000489272 KIF25-AS1Q9Y6Z4 181 aa2.56□□□□□ -2
CBWD1-216ENST00000489272 IGHV3-38A0A0C4DH36 116 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 C2CD4DB7Z1M9 353 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 SH3BGRLO75368 114 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 PFKFB1P16118 471 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 DRD3P35462 400 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 KHKP50053 298 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 DDX10Q13206 875 aaKnown RBP2.55□□□□□ -2
CBWD1-216ENST00000489272 SRSF9Q13242 221 aaKnown RBP eCLIP2.55□□□□□ -2
CBWD1-216ENST00000489272 TRA2AQ13595 282 aaKnown RBP eCLIP2.55□□□□□ -2
CBWD1-216ENST00000489272 CUL3Q13618 768 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 PCLAFQ15004 111 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 NTRK2Q16620 822 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 CBWD6Q4V339 395 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 CBWD3Q5JTY5 395 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 RSBN1Q5VWQ0 802 aaPredicted RBP2.55□□□□□ -2
CBWD1-216ENST00000489272 PRR27Q6MZM9 219 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 Q6ZVH6 145 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 SLC24A5Q71RS6 500 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 CD177Q8N6Q3 437 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 RTL3Q8N8U3 475 aaKnown RBP2.55□□□□□ -2
CBWD1-216ENST00000489272 APPL2Q8NEU8 664 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 SPPL2AQ8TCT8 520 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 MPP4Q96JB8 637 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 LINC00167Q96N53 147 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 ZIM3Q96PE6 472 aa2.55□□□□□ -2
CBWD1-216ENST00000489272 MRPL1Q9BYD6 325 aaKnown RBP2.55□□□□□ -2
CBWD1-216ENST00000489272 CPSF3Q9UKF6 684 aaKnown RBP2.55□□□□□ -2
CBWD1-216ENST00000489272 COL16A1Q07092 1604 aaPredicted RBP2.54□□□□□ -2
CBWD1-216ENST00000489272 IQCMA0A1B0GVH7 501 aa2.54□□□□□ -2
CBWD1-216ENST00000489272 A0A1W2PPQ1 181 aa2.54□□□□□ -2
CBWD1-216ENST00000489272 TLX2O43763 284 aaPredicted RBP2.54□□□□□ -2
CBWD1-216ENST00000489272 TSPAN9O75954 239 aa2.54□□□□□ -2
CBWD1-216ENST00000489272 ZBTB25P24278 435 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms