RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 HAUS8Q9BT25 410 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 CRB3Q9BUF7 120 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 TRIM55Q9BYV6 548 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 DRC3Q9H069 523 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 ATG10Q9H0Y0 220 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 EPN3Q9H201 632 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 SOX17Q9H6I2 414 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 SLC6A20Q9NP91 592 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 ATP13A2Q9NQ11 1180 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 SLAMF7Q9NQ25 335 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 P4HTMQ9NXG6 502 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 STOX2Q9P2F5 926 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 SLC17A6Q9P2U8 582 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 TRPC4Q9UBN4 977 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 DYRK1BQ9Y463 629 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 PCDHGA9Q9Y5G4 932 aaKnown RBP8.72□□□□□ -1.01
HDAC6-232ENST00000489053 KLK4Q9Y5K2 254 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 TEX264Q9Y6I9 313 aa8.72□□□□□ -1.01
HDAC6-232ENST00000489053 LOC105369274A0A096LPK9 316 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 LOC102723532A0A0G2JNH3 316 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 FAM95CA0A1B0GW59 222 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 A0A1W2PPV9 198 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 FITM1A5D6W6 292 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 MAP2K7O14733 419 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 HAT1O14929 419 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 EIF3HO15372 352 aaKnown RBP eCLIP8.71□□□□□ -1.022e-11■■□□□ 13.1
HDAC6-232ENST00000489053 PRICKLE3O43900 615 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-232ENST00000489053 KLF7O75840 302 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-232ENST00000489053 GUCA1CO95843 209 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 S100BP04271 92 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-232ENST00000489053 SERPIND1P05546 499 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 CAPN1P07384 714 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 HEXBP07686 556 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 SLC35G6P0C7Q6 338 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 ERGP11308 486 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 ACPPP15309 386 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 IVDP26440 423 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 IMPA1P29218 277 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 CCR8P51685 355 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 PLTPP55058 493 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 FRG1Q14331 258 aaKnown RBP8.71□□□□□ -1.02
HDAC6-232ENST00000489053 TUBB8Q3ZCM7 444 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 DCAF10Q5QP82 559 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 VWA5B1Q5TIE3 1220 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 GARNL3Q5VVW2 1013 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 ZNF385CQ66K41 422 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-232ENST00000489053 STEAP4Q687X5 459 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 DUPD1Q68J44 220 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 C8orf74Q6P047 294 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 TRMT10BQ6PF06 316 aaKnown RBP8.71□□□□□ -1.02
HDAC6-232ENST00000489053 PAQR7Q86WK9 346 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 OR4N4Q8N0Y3 316 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 C17orf53Q8N3J3 647 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-232ENST00000489053 GALNT16Q8N428 558 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 CAMKVQ8NCB2 501 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 MNS1Q8NEH6 495 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 ADAMTS17Q8TE56 1095 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 METTL21AQ8WXB1 218 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 NACC2Q96BF6 587 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 MVB12AQ96EY5 273 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 FAM129AQ9BZQ8 928 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 GPAMQ9HCL2 828 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 SEMA3GQ9NS98 782 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 TMEM184CQ9NVA4 438 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 CTNNAL1Q9UBT7 734 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 CTSFQ9UBX1 484 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 C3orf18Q9UK00 162 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 FBXL4Q9UKA2 621 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 PDE10AQ9Y233 779 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 MED16Q9Y2X0 877 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 ASH1LQ9NR48 2969 aaKnown RBP8.71□□□□□ -1.02
HDAC6-232ENST00000489053 LRRK2Q5S007 2527 aa8.71□□□□□ -1.02
HDAC6-232ENST00000489053 H3BMH7 237 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 AGPSO00116 658 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 RAD51CO43502 376 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 VPS4BO75351 444 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 URI1O94763 535 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 CDH1P12830 882 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 FDXRP22570 491 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 MMP11P24347 488 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 VARSP26640 1264 aaKnown RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 STX2P32856 288 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 EMP3P54852 163 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 AP2B1P63010 937 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 AIMP2Q13155 320 aaKnown RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 DSG2Q14126 1118 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 CSHL1Q14406 222 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 FASTKD3Q14CZ7 662 aaKnown RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 NKG7Q16617 165 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 HKDC1Q2TB90 917 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 COLEC12Q5KU26 742 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 MRPL14Q6P1L8 145 aaKnown RBP8.7□□□□□ -1.02
HDAC6-232ENST00000489053 FBXO42Q6P3S6 717 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 CYHR1Q6ZMK1 362 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 MBOAT1Q6ZNC8 495 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 CEP128Q6ZU80 1094 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 RAPH1Q70E73 1250 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 ADAMTSL2Q86TH1 951 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 PLD3Q8IV08 490 aa8.7□□□□□ -1.02
HDAC6-232ENST00000489053 ZADH2Q8N4Q0 377 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms